Dr. Rahim Amna

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Dr. Rahim Amna

Dr. Rahim Amna

@CrisprCrops

Assistant Professor | Plant Molecular Biologist & Bioinformatician | Genome Editing and Transformation

Beigetreten Mayıs 2024
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HKBU Department of Biology
HKBU Department of Biology@hkbubiology·
HKBU Biology Postdoctoral Researchers Recruitment! Prof Zhao Zhongying
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WIMI Biotech
WIMI Biotech@wimi_biotech·
📚Research into plant gene function is crucial for developing strategies to increase crop yields. The recent introduction of large language models (LLMs) offers a means to aggregate large amounts of data into a queryable format, but the output can contain inaccurate or false claims known as hallucinations. To minimize such hallucinations and produce high-quality knowledge-based outputs, the abstracts of over 60 000 plant research articles are compiled into a Chroma database for retrieval-augmented generation (RAG). Then linguistic data are used from 13 993 Arabidopsis (Arabidopsis thaliana) phenotypes and 23 323 gene functions to fine-tune the LLM Llama3-8B, producing PlantGPT, a virtual expert in Arabidopsis phenotype–gene research. By evaluating answers to test questions, it is demonstrated that PlantGPT outperforms general LLMs in answering specialized questions. The findings provide a blueprint for functional genomics research in food crops and demonstrate the potential for developing LLMs for plant research modalities. To provide broader access and facilitate adoption, the online tool plantgpt.icu is developed, which will allow researchers to use PlantGPT in their scientific investigations.
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WIMI Biotech
WIMI Biotech@wimi_biotech·
🧬WIMI is thrilled to share that the team led by Academician Liu Yaoguang and Researcher Zhu Qinlong from the College of Agriculture at South China Agricultural University, in collaboration with Tsinghua University "PlantGPT: An Arabidopsis - based Intelligent Agent That Answers Questions About Plant Functional Genomics" 📚PlantGPT, available at plantgpt.icu, integrates Retrieval - Augmented Generation (RAG) technology and fine - tuned Large Language Model (LLM) to provide accurate answers to plant functional genomics questions. It's a powerful AI - assisted tool for plant science research. advanced.onlinelibrary.wiley.com/doi/10.1002/ad…
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WIMI Biotech
WIMI Biotech@wimi_biotech·
🌱WIMI, known as “未米” meaning “the future crops” in Chinese, has been the top provider of fee-for-service plant transformation since 2017. 🧬We have built a comprehensive transformation platform covering over 20 plant species like rice, maize, cotton, wheat, barley, soybean, tomato, cucumber, lettuce, potato, canola, melon, pepper, watermelon, chieh - qua, coix, alfalfa, bottle gourd, sesban, cabbage, and tobacco. #VectorConstruction #GeneticTransformation
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James Gahan
James Gahan@JM_Gahan·
My group is hiring a new Postdoc to work on gene regulation and chromatin in Nematostella. Please RT! For more information see here: gahanlab.com tinyurl.com/34xke35d
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GrainGenes
GrainGenes@GrainGenes·
Open position: Assistant/Associate Professor of Genetics Teaching in the Depts of Agronomy and Horticulture at the U. of Nebraska-Lincoln wheat.pw.usda.gov/GG3/content/as…
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Shujun Ou
Shujun Ou@SigmaFacto·
Hello world! I have a postdoc position immediately available in my lab. It will focus on identifying high-quality transposons in many genomes and finding their impacts in evolution and traits. Most works, including EDTA2 development and annotation of 400+ genomes, are done! 1/n
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Charles Melnyk
Charles Melnyk@CharlesMelnyk·
A PhD position is available in my group @_SLU. Come join us in Uppsala, Sweden to work on plant regeneration and graft hybrid formation! Details below. Please RT. #plantgrafting #plantscijobs
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Sanjeev Varshney
Sanjeev Varshney@skvdst·
Paid Internship in Saudi -@KAUST for 3rd/4th-year UG and PG students in science, technology, engineering, and mathematics. Internship time flexible. KAUST covers tuition fees, housing, return flights, and provides a monthly stipend for living expenses. At admissions.kaust.edu.sa/study/internsh…
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