Farzin Soleymani

Very happy that our paper "CliquePH: Higher-Order Information for Graph Neural Networks through Persistent Homology on Clique Graphs" has been accepted at @LogConference ! a huge thanks to my co-authors @csfarzin @Pseudomanifold

1/n: 🔬We introduce NicheCompass (NC) a graph learning model to build spatial atlases across millions of cells, quantitatively characterize cell niches, infer cellular communication, and map new data into these atlases. NC can be used with various spatial technologies, ranging from cellular to subcellular resolution including even multimodal approaches. We have explored interesting biology by analyzing cell niches spanning from development to cancer. Led by @SebastianBirk_ in a fun colab with @cartalop: paper: tinyurl.com/yht27w8h

I’m gonna give 10 random people that repost this and follow me $25,000 for fun (the $250,000 my X video made) I’ll pick the winners in 72 hours

Our paper “Probabilistic Self-supervised Representation Learning via Scoring Rules Minimization” with @AmirhVahidi , Simon Schosser, @WmLisa ,@LI_YAWEI_7 ,@BBischl , and @eyke_hu from @LMU_Muenchen has been accepted at #ICLR_2024. Preprint 📚: arxiv.org/pdf/2309.02048…

Delighted to finally announce that Lotfollahi Lab starts this year at @sangerinstitute and @CC4AIM in Cambridge University. The lab will develop core AI/ml systems and also generate large scale multi-modal cellular data to advance cell engineering: sanger.ac.uk/group/lotfolla…

@mo_lotfollahi @ELLISforEurope @MagnusRattray @BockLab @Pseudomanifold Congrats on your well-deserved success! You're an inspiration! 🎉✨

Really excited to announce that I have joined @ELLISforEurope, special thanks to @MagnusRattray and @BockLab and also @Pseudomanifold for their support throughout the process. Looking forward to work with this amazing community

Which epitope mutations escape the T cell Response? “Predicting T cell Epitope-specific Activation against Mutant versions” (P-TEAM) doi.org/10.1101/2023.0… ML meets Wet-lab! Big THANKS for the collab with @edorigatti, Adrian Straub, Dirk BuschLab, @kischober @schubert_benni

Best practices for single-cell analysis across modalities go.nature.com/3K1Y3Pv #ExpertRecommendation

@DrostFelix @causal_cell @Mila_Quebec Happy Nowruz! 🥳 #Nowruz

Visiting Canada from Germany and celebrating Persian New Year with colleagues from all over the world. Thanks @causal_cell and everyone at @Mila_Quebec for letting me take part in this fantastic exchange of research and cultures. And Happy Nowruz!!!

Eager to develop computational tools and infrastructure for single-cell immune profiling data? Want to help shape the new #TRR355 between Munich and Mainz? 🚨Then join us as Bioinformatics PostDoc🚨 @HelmholtzMunich, @CompHealthMuc tinyurl.com/yc23f9hx

If you're a professor or a student in STEM in a Western country, you probably know someone from the Sharif University of Technology in Iran. They might have be your students, peers, or friends. That university is now under attack by the Islamic Republic. 🧵(1/16) #MahsaAmini

Niagara Falls will be illuminated tonight at 8:30pm in green, white and red, for 22 minutes, in memory of Mahsa Amini.

What a remarkable image. The daughter of Minoo Majidi--a mother of two who was killed by the Iranian regime while protesting for #MahsaAmini--stands at her mother's gravesite. She is defiantly unveiled, and in her left hand she holds the hair she cut from her head.

Hamvataneh azizam, delam ba shomast. Arehzooyeh mowafaghiat barayeh hameyeh zanan va mardomeh Iran daram. Beh omideh roozeh azadi 🙏 #MahsaAmini youtube.com/watch?v=aIhCAi…

Hey World! This is the kind of news we Iranians wake up to every day. Another brave beautiful young woman is dead. Hey World! Where the fuck are you? Her name was #Hadis_Najafi More women and men will get killed while you are silent. Be their voice. #MahsaAmini #OpIran

Who do you call when the police MURDERS? #مهسا_امینی

I send my love to the Iranian people who are standing up for their freedom.

Protests largely initiated by women in Iran have led to widespread antigovernment demonstrations and extraordinary scenes of dissent. Here's what to know. nyti.ms/3UswoMl

The Iranian regime is killing young women who protest against its misogyny. #HananehKian #MahsaAmini

Women are at the centre of the anti-regime protests that have exploded across Iran.