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Our paper describing the new Toolkit is out!
sciencedirect.com/science/articl…
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MPI Bioinformatics Toolkit (MPI for Biology)
518 posts
MPI Bioinformatics Toolkit (MPI for Biology)
@mpitoolkit
An integrative platform for protein sequence and structure analysis. Tweets by @Vikram_Alva https://t.co/An2CMmrOun @MPI_Bio
Tübingen, Germany Beigetreten Şubat 2017
108 Folgt1.2K Follower
MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Donor Strand Complementation and Calcium Ion Coordination Drive the Chaperone-free Polymerization of Archaeal Cannulae biorxiv.org/content/10.110…
Happy that the preprint is now published. Great collaboration with fantastic colleagues. @conticellolab @EmoryChem
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
This story started 5y ago with my lab. Spearheaded by fearless 1st authors @theopi and Olivia Leland. Theopi is now a PhD student at @BrownUniversity. Olivia is a physics PhD student at @BrandeisU, a self-taught biologist, and made us love soft matter. A (very long) thread (1/24)
bioRxiv Cell Biology@biorxiv_cellbio
Tissue-Like Multicellular Development Triggered by Mechanical Compression in Archaea biorxiv.org/cgi/content/sh… #biorxiv_cellbio
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Excited to share our team's discovery on tissue-like multicellularity in archaea under mechanical compression! Led by @theopi, Olivia Leland & @Archaeon_Alex, it rethinks the evolution of multicellularity beyond eukaryotes. @HFSP @MPI_Bio
biorxiv.org/cgi/content/sh…
Alex Bisson@Archaeon_Alex
This story started 5y ago with my lab. Spearheaded by fearless 1st authors @theopi and Olivia Leland. Theopi is now a PhD student at @BrownUniversity. Olivia is a physics PhD student at @BrandeisU, a self-taught biologist, and made us love soft matter. A (very long) thread (1/24)
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
New paper online @PNASNews! Great collab with @Vikram_Alva, @PohlschroderLab, @SchmidLab and inspiring team work within the Bisson lab.
PNAS: shorturl.at/tzNqn
Preprint: shorturl.at/Wi58N
Blurb: shorturl.at/vMZsZ
highlights below (1/4)
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
I am very pleased to share our recent study on prokaryotic histone structure and diversity nature.com/articles/s4146… Great work by PhD student @SammyBoterhammy. With @aimeelboyle, @Vikram_Alva, Birte Hernandez Alvarez, Yimin Hu, @MPI_Bio, @LeidenScience
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Some bacteria have proteins much like ours that organise their DNA. Biochemists from @DameLab & the @MPI_Bio reveal this in a new paper. Their work helps us better understand evolution & how bacteria organise their DNA. Read: universiteitleiden.nl/en/news/2024/0…
@Vikram_Alva
@SammyBoterhammy
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Thrilled to share our manuscript on bacterial histone HBb from Bdellovibrio in @NAR_Open! We report DNA-bound HBb structures, showing its DNA bending properties. With Birte Hernandez Alvarez, @DameLab, Yimin Hu, @SammyBoterhammy, @MPI_Bio, @LeidenScience
academic.oup.com/nar/advance-ar…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
I am excited to share our new preprint on the structure of S-layers. The work is a collaboration between @OxfordChemistry (Ed Johnston and myself) and @buse_isbilir and @TBharat_lab at @MRC_LMB and @Vikram_Alva at @MPI_Bio. 🧵 1/11
biorxiv.org/content/10.110…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Excited to share our new preprint on S-layers! We've modeled ~150 S-layers spanning the prokaryotic tree of life. Great collaboration with Ed Johnston, @JonathanDoye at @OxfordChemistry, @buse_isbilir, @TBharat_lab at @MRC_LMB, and myself at @MPI_Bio.
Jonathan Doye@JonathanDoye
I am excited to share our new preprint on the structure of S-layers. The work is a collaboration between @OxfordChemistry (Ed Johnston and myself) and @buse_isbilir and @TBharat_lab at @MRC_LMB and @Vikram_Alva at @MPI_Bio. 🧵 1/11 biorxiv.org/content/10.110…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Happy to share our review on the versatile and emerging roles of PII-like proteins in cell signaling, coordinating vital metabolic states across life forms. @MPI_Bio
Khaled A. Selim@Selim_Khaled_
Happy to share our recent view on #PII-LIKE signaling w/ @Vikram_Alva @BUnifr & @MPI_Bio in Current Opinion in Microbiology PII-LIKE proteins are widespread in all life domains including: bacteria, archaea, phages, fungi, plants, metazoa, animals & human sciencedirect.com/science/articl…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
🔬Excited to share the revised version of our manuscript on the bacterial histone HBb from Bdellovibrio, led by Yimin Hu and @SammyBoterhammy. A fantastic collaboration with Birte Hernandez Alvarez, @DameLab, @HartmannLab.
@MPI_Bio @LeidenScienceEN
biorxiv.org/content/10.110…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
🌱 Thrilled to share our latest research on #BrownAlgae sex determination! Led by Susana Coelho, our team has revealed a fascinating connection between the sex determination processes in brown algae and animals. #Evolution @MPI_Bio science.org/doi/10.1126/sc…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Thrilled to share our latest preprint on BiorXiv! A fantastic team effort led by @za_curtis, Pedro Escudeiro, and John Mallon! Check out @Archaeon_Alex's thread for a quick dive into our exciting findings! 🔬
Alex Bisson@Archaeon_Alex
We have a new story out at BiorXiv! Amazing work led by @za_curtis (Bisson), Pedro Escudeiro (Alva) and John Mallon (Bisson). Great collaboration with @Vikram_Alva (Max Planck) and @pohlschr (UPenn). A summary of our findings in the thread (1/22) shorturl.at/fLPR1
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
We have a new story out at BiorXiv! Amazing work led by @za_curtis (Bisson), Pedro Escudeiro (Alva) and John Mallon (Bisson).
Great collaboration with @Vikram_Alva (Max Planck) and @pohlschr (UPenn).
A summary of our findings in the thread (1/22)
shorturl.at/fLPR1
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
For those of you who missed this post last year, I welcome applications until the end of January. This is approximately 50% bench and 50% computation, involving both microbiology and plant work.
derekseveri.bsky.social@DerekSeveri
A PhD position is available in my group at @_SLU starting in 2024 thanks to a new grant from @Vetenskapsradet. The application deadline is 31 Jan. 2024. The preferred start date is late spring or summer 2024. Apply via this link: slu.se/en/about-slu/w… More details in thread 👇
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
We are hiring! Calling all outstanding candidates in the field of intelligent systems to establish up to two new W2 independent #research groups at our institute's #Stuttgart site: #Robotics, Human-Machine Interaction, Robotics for #Healthcare, #AI etc.
is.mpg.de/jobs/research-…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Delving deeper, we used DAP-seq to reveal that HBb binds along the entire genomic DNA of B. bacteriovorus without sequence specificity. The wonders of bacterial histones continue to unfold! Dive into our manuscript for more details: 👉 biorxiv.org/content/10.110…
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
🔬New insights on bacterial histones! 🧬 Our study, led by Yimin Hu & @SammyBoterhammy, shows that in Bdellovibrio bacteriovorus, HBb bends DNA uniquely, differently from eukaryotic & archaeal histones. Great collaboration with Birte Hernandez, @DameLab. @MPIBio @LeidenScienceEN
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MPI Bioinformatics Toolkit (MPI for Biology) retweetet
Now online our studies on the role of the Bdellovibrio bacteriovorus bacterial histone in chromatin organization biorxiv.org/content/10.110…
Great collaboration between @Vikram_Alva, Birte Hernandez and @DameLab spearheaded by Yimin Hu and @SammyBoterhammy. @MPIBio @LeidenScienceEN
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