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Our team this month and we were nearly complete!😎#CompMetabolomics #Metabolomics #Wageningen @WU_BioInfo @WURplant @WUR
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VanDerHooft_CompMetabolomics_Group
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VanDerHooft_CompMetabolomics_Group
@vdHooft_CompMet
Enthusiastic group of researchers in #Computational #Metabolomics embedded in @WU_BioInfo @WURplant @WUR #Wageningen #University. Account run by group members.
Beigetreten Eylül 2021
380 Folgt1.4K Follower
VanDerHooft_CompMetabolomics_Group retweetet
Fantastic #community #effort for #naturalproducts #discovery through #genome #mining! 😎 Great leadership by @MitjaMZ to get everyone on board and MIBiG 4.0 out 👏 #ProudPI
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VanDerHooft_CompMetabolomics_Group retweetet
We are now contributing to the understanding of #DREAMOLECULE biosynthesis @BioCIS @UnivParisSaclay @SzwarcSarah
MIACYC Project@miacyc_anr
Happy to share our new exciting discovery! Geissoschizine cyclase in Alstonia scholaris revolutionizes the understanding and synthesis of pharmacologically important monoterpenoid indole alkaloids. Learn more: miacyc.univ-tours.fr/geissoschizine…
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We are so happy to see this one online! ☺️ We look forward to hear your thoughts, views, and see your favorite metabolomics visualizations 😊 #visualization #metabolomics #CompMetabolomics
Justin van der Hooft@jjjvanderhooft
🚨 New Publication Alert 🚨 Effective #Visualization Strategies in Untargeted #Metabolomics - a review! This was a real #team effort and combined various disciplines! Very #ProudPI in #CompMetabolomics 😊😎 Please find the link and read more about it here: linkedin.com/posts/jjjvande…
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Thanks to Kgalaletso Othibeng for visiting #Wageningen to connect with my #CompMetabolomics team at the #Wageningen #Bioinformatics Group @WU_BioInfo, @WURplant, @WUR. Thanks @fideletu Fidele Tugizimana University of Johannesburg @go2uj for the shared supervision! 😎
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VanDerHooft_CompMetabolomics_Group retweetet
Highlighting the @EMN_MetSoc ECR Voices Lead, @simonezuffa! Simone is a PostDoc at @UCSDPharmacy working on untargeted #metabolomics and #metagenomics to investigate the role of the gut #microbiome in health. #EMN_MetSoc
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VanDerHooft_CompMetabolomics_Group retweetet
Check out our new opinion paper on plant biosynthetic pathway discovery, spearheaded by #FeliciaWolters, @elena_delpup et al.
Elena Del Pup@elena_delpup
How do we pair omics to decode the diversity of 🌱plant specialized metabolism? In our latest paper, we present a perspective on how paired omics can support a collaborative effort to characterise the plant metabolome. @marnixmedema @jjjvanderhooft sciencedirect.com/science/articl…
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VanDerHooft_CompMetabolomics_Group retweetet
How do we pair omics to decode the diversity of 🌱plant specialized metabolism? In our latest paper, we present a perspective on how paired omics can support a collaborative effort to characterise the plant metabolome. @marnixmedema @jjjvanderhooft
sciencedirect.com/science/articl…
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VanDerHooft_CompMetabolomics_Group retweetet
New preprint! We predict the fragmentation spectrum of metabolites and small molecules using machine learning, and use the predictions to annotate metabolites
biorxiv.org/content/10.110…
Great work by Maribel Pérez-Ribera and yet another fruitful collaboration with the @yaneslab
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Thanks for your positive and constructive contributions to our team! #CompMetabolomics
Justin van der Hooft@jjjvanderhooft
Safe travels Dora! 😎 linkedin.com/posts/jjjvande…
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Join our team as a postdoc if the below 👇 sounds like you!! In collaboration with @UniLeiden #CompMetabolomics #RiPPs
Justin van der Hooft@jjjvanderhooft
🚨 Job Alert - 2 year Postdoc 🚨 Somayah Elsayed and myself seek an enthousiastic candidate for a two year postdoctoral position in the topic of Ribosomally synthesized and post-translationally modified peptides (RiPPs)! 😎 For more information see 👇 linkedin.com/posts/jjjvande…
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VanDerHooft_CompMetabolomics_Group retweetet
🚨You can still apply for the NPLinker eScience Workshop to be held in March 2025, in Wageningen, the Netherlands! Applications will close at the end of October!!🚨 😎
#integrative #genomics #metabolomics
Please find more information in the link below 👇
linkedin.com/posts/jjjvande…
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Want to give it a try?! Find example data to load into the interactive dashboard, and instructions on how to install and run msFeaST here --> github.com/kevinmildau/ms…
Work with Christoph Büschl and Jürgen Zanghellini @enit7677 @stem_univie
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We use the #mushroom dataset from @Soliman72227832 Khatib as an example to find mushroom 🍄 type and treatment-related metabolite features.
#msFeaST takes as input @mzmine_project 3 preprocessed #metabolomics data.
Read it here --> academic.oup.com/bioinformatics…
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🚨 New publication 🚨 Many congrats to former team member Kevin Mildau👏🎉 In our application note, we propose msFeaST, a novel mass spectral grouping approach combined with group-based statistics to prioritize metabolite features! #metabolomics
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VanDerHooft_CompMetabolomics_Group retweetet
Join us in #Wageningen @WURplant @WUR, also with @eScienceCenter instructors @CrocioniGiulia and @CunliangGeng for the second NPLinker eScience workshop in March 2025. Express your interest through the application form before the end of this month!! 😎
Marnix Medema@marnixmedema
Exciting paired omics mining workshop coming up in Wageningen, with international team of teachers @jjjvanderhooft @kate_duncan @Pdorrestein1 @tilmweber @MargheSosio, yours truly and more. Sign up now!!
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We are thankful to @Abzerkelmina, @ernst_Madeleine, and @func_metabo_lab for taking the lead on this effort! 😎 We hope that many in the #metabolomics and #CompMetabolomics communities will benefit from it, also for #teaching purposes!
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Congrats 👏 🎉 to former group member Kevin Mildau and @jjjvanderhooft who joined the #VMOL #community to work on a protocol that combines molecular networking and statistical analyses, the qualitative and quantitative aspects of untargeted metabolomics: nature.com/articles/s4159…
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VanDerHooft_CompMetabolomics_Group retweetet
🚨You can now apply for the #NPLinker eScience Workshop to be held in March 2025, in Wageningen, the Netherlands! 🚨 😎
The application form is open till the end of October!
Link to the form: forms.office.com/e/PsZiktgjvi
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