CompBiolPapers

MALAT1 expression indicates cell quality in single-cell RNA sequencing data [NEW RESULTS] dlvr.it/T9kQ5n

Accurate isoform quantification by joint short- and long-read RNA-sequencing [NEW RESULTS] dlvr.it/T9Yzy5

Reinforcement learning guides single-cell sequencing in decoding lineage and cell fate decisions [NEW RESULTS] dlvr.it/T9LMTX

Identifying Alzheimer's disease-related pathways based on whole-genome sequencing data [NEW RESULTS] dlvr.it/T9CqLp

MAJIQ V3 offers improvements in accuracy, performance, and usability for splicing analysis from RNA sequencing [NEW RESULTS] dlvr.it/T99fsQ

Accelerated dimensionality reduction of single -cell RNA sequencing data with fastglmpca [NEW RESULTS] dlvr.it/T99CfJ

SCEMENT: Scalable and Memory Efficient Integration of Large-scale Single Cell RNA-sequencing Data [NEW RESULTS] dlvr.it/T98VzZ

Nanopore Direct RNA Sequencing Reveals Virus-Induced Changes in the Transcriptional Landscape in Human Bronchial Epithelial Cells [NEW RESULTS] dlvr.it/T8wRhH

Characterization of transcriptional heterogeneity and novel therapeutic targets using single cell RNA-sequencing of primary and circulating Ewing sarcoma cells. [NEW RESULTS] dlvr.it/T8Z9ff

Phasing Diploid Genome Assembly Graphs with Single-Cell Strand Sequencing [NEW RESULTS] dlvr.it/T8XrN3

Damsel: Analysis and visualisation of DamID sequencing in R [NEW RESULTS] dlvr.it/T8HYHJ

Comparison of sequence- and structure-based antibody clustering approaches on simulated repertoire sequencing data [NEW RESULTS] dlvr.it/T8Fbgd

Sensitive tumor detection, accurate quantification, and cancer subtype classification using low-pass whole methylome sequencing of plasma DNA [NEW RESULTS] dlvr.it/T88Zw3

VILOCA: Sequencing quality-aware haplotype reconstruction and mutation calling for short- and long-read data [NEW RESULTS] dlvr.it/T83zCq

A dedicated caller for DUX4 rearrangements from whole-genome sequencing data [NEW RESULTS] dlvr.it/T7zDtt

Optimal sequencing depth for measuring the concentrations of molecular barcodes [NEW RESULTS] dlvr.it/T7tsB0

GCRTcall: a Transformer based basecaller for nanopore RNA sequencing enhanced by gated convolution and relative position embedding via joint loss training [NEW RESULTS] dlvr.it/T7rJLk

D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response [NEW RESULTS] dlvr.it/T7pz0v

Leveraging epigenetic signatures to determine the cell-type of origin from long read sequencing data [NEW RESULTS] dlvr.it/T7nGRS

Amplified DNA Heterogeneity Assessment with Oxford Nanopore Sequencing Applied to Cell Free Expression Templates [NEW RESULTS] dlvr.it/T7nGPc