Open Genes (Bluesky: open-genes)

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Open Genes (Bluesky: open-genes)

Open Genes (Bluesky: open-genes)

@OpenGenes

🧬 Open-source biological database of human genes associated with aging

doi/10.1093/nar/gkad712 Присоединился Mart 2020
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Open Genes (Bluesky: open-genes)
Special thanks to trenspotter for submitting the Czech translation and committing a fix. We will include all new fixes for our translations in the new release, along with the new workflow for fetching translations from Localazy
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Open Genes (Bluesky: open-genes) ретвитнул
João Pedro de Magalhães
João Pedro de Magalhães@jpsenescence·
João Pedro de Magalhães tweet media
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Open Genes (Bluesky: open-genes)
Read more about confidence levels, and why we pay attention to maintaining them in the Open Genes database, in our paper: #434769135" target="_blank" rel="nofollow noopener">academic.oup.com/nar/article/52… 2/2
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Open Genes (Bluesky: open-genes)
We added a dataset featuring genes and their confidence levels for download. open-genes.com/download We divided genes into groups with different confidence levels based on the type of data supporting the link between the gene and aging. 1/2
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Open Genes (Bluesky: open-genes)
Open Genes now has a new main page. We also added a support chat so you could ask any questions you may have or report a bug
Open Genes (Bluesky: open-genes) tweet media
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Open Genes (Bluesky: open-genes)
That’s true that reproducibility and questionable quality of controls are vast problems in aging research, both in genetic manipulation experiments and drug testing. In the Open Genes database, we have collected detailed experimental data specifically to be able to analyze the reproducibility of results, the quality of controls, and the most optimal conditions for prolonging life. We tried to take into account everything possible: we collected the controls lifespan, sample size, experimental procedure data, age of therapy initiation, tissue specificity, and everything that can influence the result. The conclusion we made regarding the experiments in mice: for 40 genes there is more than one experiment and no conflicting results (see figures), and there are only 4 experiments with control lifespans above 850 days (SIRT6, GPX4, TRPV1, MTOR). This, of course, does not mean that there are no reliable genetic targets for extending lifespan in mice. However it's a really long road to developing a therapy that works in humans. Read more in our paper: doi.org/10.1093/nar/gk… open-genes.com
Open Genes (Bluesky: open-genes) tweet mediaOpen Genes (Bluesky: open-genes) tweet media
Aleksandr Sviridov@lex_sviridov

🧵 (1/6) Two years ago, when I only started digging into the current state of aging research, I was much more optimistic about our progress. I read articles like Laura Deming's Longevity FAQ, which lists "95 things that make mice live longer", and thought: "Well, at least we have something that works for mice, right?" Boy, I was naive! Well, below is a list of findings that made me think we have almost nothing that reliably works on mice. The Longevity FAQ post: #95thingsthatmakemicelivelonger" target="_blank" rel="nofollow noopener">ldeming.com/longevityfaq#9….

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Longevity ACC
Longevity ACC@longevity_acc·
By today, Longevity Gene has wrapped up all the projects that applied to our labcoat donation auction program. We’ve picked the 3 outstanding projects from the competitive applications. The winning ones are @LBF_org @OpenGenes and @FirstApproval.
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