Dilara A.

Our paper is now live on bioRxiv! 🤩@georgietos has done an amazing job breaking it down in this thread. Take a look!🥳

Amsterdam, #Pint24 is coming for you in a few weeks! 🧠 🪴⚕️Leading researchers will present research on neuroscience, plant systems and immunology! Come along to the #PintNL events at your local pub to learn more. Tickets available now 🎟️

Come join us! 🧠🧑‍💻

simpleaf : A simple, flexible, and scalable framework for single-cell data processing using alevin-fry. #SingleCell #DataProcessing #Rust #Bioinformatics @nomad421 academic.oup.com/bioinformatics…

The new issue is out! Just in time for #WorldAlzheimersMonth, Cell features four articles that together demonstrate the genomic, epigenomic, and transcriptomic dysregulations underpinning Alzheimer's disease at single-cell resolution across cell types. To read more click here👉cell.com/cell/current

Ever analyze a scRNAseq dataset and wonder if a specific cell state has been seen before? And if so, where in the human body? Under what conditions? Well, now you can use our lightning fast SCimilarity search and foundational model for that! ⚡️🔎🧬 biorxiv.org/content/10.110… (1/11)

What is a cell type? What is cell state? in the single-cell era, 4 papers discussing this topic 👇 🧵

10 benchmark papers on single-cell data 👇 🧵

Happy to share our recent work now published in @iScience_CP. Great collaborative effort between Amsterdam 🇳🇱 (@LabSalta ) and Leuven 🇧🇪(@DeStrooperLab). sciencedirect.com/science/articl… A thread 🧵

Gene regulatory networks (GRNs) are useful models to understand cellular identity and disease. We have reviewed the GRN inference field in the current era of single-cell multi-omics 📖 out in @NatureRevGenet 🔗doi.org/10.1038/s41576… Full-text access: rdcu.be/dfpa2

📢Really looking forward to sharing our latest research on #AdultNeurogenesis in #HumanBrain this September!! 🧠🌱 Chaired by Gerd Kempermann @CRTDpress @DZNE_de, organized by @abcam 👇🏾 abcam.com/events/adult-n… #progresshappenstogether #Alzheimers #regeneration #neuroscience

Only 7 days before #pint23!✨ 🐝🧪👩‍🔬📚🔬👓🧠🐟🫀💫🥼👨‍🔬🔭🧫🦴 🗓️22nd-24th May 2023 🗺️26 countries 📍400 cities/towns around the world All the information : pintofscience.com

Read this new Special Issue on adult #neurogenesis in the #Hippocampus. 👇 @HasselmoMichael Included articles and reviews highlight current developments in the field. See for yourself: ow.ly/kUA350NAL7f

Incredibly proud to see our benchmark of single-cell preprocessing methods finally published 🥳🥳🎉 We show that despite its theoretical limitations, no other transformation consistently outperforms log(y/s+1). All details at nature.com/articles/s4159… and github.com/const-ae/trans…

Is our brain able to regenerate? And can we harness this regenerative potential during aging or in neurodegenerative conditions? A new study shows why there are conflicting results and proposes a roadmap on how to solve these issues. nin.nl/news/how-do-we…

I am very proud to share our recent publication: "Mapping human adult hippocampal neurogenesis with single-cell transcriptomics: reconciling controversy or fueling the debate?" Check @georgietos's thread out! 🥳

We've been working on Seurat v5 for two years and are excited to share it with you soon! In a webinar w/@10xGenomics and @ScienceMagazine on 3/29, I'll introduce new methods to analyze spatial/multimodal datasets that scale to tens of millions of cells: view6.workcast.net/register?cpak=…

I need to raise awareness about an important point in #scRNAseq data analysis, which, in my opinion, is not acknowledged enough: ‼️In practice, most cell type assignment methods will fail on totally novel cell types. Biological/expert curation is necessary! Here's one example👇

🧠We are trying to make a big list of all the coolest #neuroscience conferences ✍️. Please, comment below to tell us some of your favorite conferences you attend❤️! If you know the dates for the next one, we'd love to hear that too. #neurotwitter #AcademicTwitter #AcademicChatter

Today is the big day! The #T2T consortium is claiming victory and announcing that we have finally uncovered every last bit of the human genome! The papers are out today 🥳🧬 science.org/toc/science/37…