ryanlayer

How to annotated SV with pop. frequency? Using @PacBio & @nanopore! Gnomad 32% & STIX: 95.9% of SV from @GenomeInABottle annotatable! Huge implications in SV filtering for eg: @GREGoR_research & #cancer & #disease studies! Lead by @wtoxzpw & @ryanlayer biorxiv.org/content/10.110…

STIX: Long-reads based Accurate Structural Variation Annotation at Population Scale biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

1/n 🌟🐝🔥 New paper alert 🌟🐝🔥 "Embracing firefly flash pattern variability with data-driven species classification" with @nguyenchantal , @RaphaelSarfati , @DieuMyNguyen , M Iuzzolino, M Chowdhury, @ryanlayer, @oritpeleg nature.com/articles/s4159…

🌟 Proud to share a new paper on the flash pattern variability of fireflies! Our work, led by @lepurplemartin & @nguyenchantal in collab with @ryanlayer’s lab, offers new insights into species identification through ML data analysis: nature.com/articles/s4159… /1

HUGE CONGRATS TO @hdashnow! news.cuanschutz.edu/dbmi/harriet-d…

Rare disease research is at the forefront of the DBMI's work. When Harriet Dashnow, PhD, (@hdashnow) joins our team this summer, she will focus on computational research, rare genetic disease, and the discovery of new causal variants. Meet Dr. Dashnow 👇 news.cuanschutz.edu/dbmi/harriet-d…

I am sad to be missing #GI2023, but please check out talks from Christopher and @kschneider_cu on Friday, posters #60 from @michael_boulder and #57 from Morteza Baradar on Thursday, and poster #178 from Xinchang Zhen and @sedlazeck on Friday.

Hypothesis Generation For Rare and Undiagnosed Diseases Through Clustering and Classifying Time-Versioned Biological Ontologies biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Excited about @michael_boulder's 1st 1st-author paper biorxiv.org/content/10.110… Mixed STRING & @hp_ontology. Used time-series learning to id co-clustered genes/traits that may explain unsolved cases. Tested on MyGene2 & @ChildrensColo patients. Slick GUI at ryanlayerlab.github.io/BOCC/)

I'm looking for talented postdocs and staff scientists/software developers to join my lab at @CUBiomedInfo If you're fascinated by #RareDisease genomics, #STRs and computational methods, please get in touch! I'm at #ASHG2023 this week, and happy to chat. #hiring

@aaronquinlan I am pretty sure that is from Tripp’s 3rd birthday

Pictured in the upper left is a poster of @ryanlayer from nearly a century ago.

A little pre-#ASHG2023 Halloween celebration for our lab and the Dept of Human Genetics @UUtah

@shishenyxx @UofUGenetics Congrats! Such a great dept.

I am thrilled to announce that I will join @UofUGenetics in 2024! Looking forward to the fantastic research community and wonderful colleagues!!! Both dry- and wet-lab positions are available for genomic mosaicism in human health and development: sites.google.com/view/xiaoxu-ya…

@fiamh @aaronquinlan @ZaminIqbal @yokofakun Happy to participate. Just let me know.

@ryanlayer @aaronquinlan @ZaminIqbal @yokofakun Would love to get you into one of the GA4GH Future of VCF calls down the road - github.com/ga4gh/future-o…

My lab has open positions for developing innovative methods at cross roads of genomics, algorithms, and machine learning. Apply here jobs.colorado.edu/jobs/JobDetail… if you have your MS and here jobs.colorado.edu/jobs/JobDetail… if you have your PhD. Reach out to me directly if you have questions.

@aaronquinlan @ZaminIqbal @yokofakun It is still around, but We are working on the next generation now.

@ZaminIqbal @yokofakun There hasn't been much use of it, but I believe @ryanlayer still maintains it.

The @jxtxFoundation for Open Science will award six scholarships for the CSHL Biology of Genomes meeting covering full conference registration to outstanding graduate students. Application deadline is February 6, 2023. For details: jxtxfoundation.org/news/2022-12-1… @cshlmeetings #bog23

Congrats to Murad Chowdhury! His #ASHG22 poster got a Reviewers Choice Award. Check it out for yourself how he is using population-scale data to improve samplot #SV visualization. PB2317 Thursday 10/27 3-445. github.com/ryanlayer/samp…

Apps are open for Interdisciplinary Quantitative Biology #PhD Program at @CUBoulder @BioFrontiers Learn both sides of #quantitative #biology with funded rotations through wet and dry labs among 11 departments. colorado.edu/certificate/iq…

You are in luck! @BioFrontiers is hiring 2+ asst profs in any area, as long as it's interdisciplinary. Work with some truly impressive people like NSF Waterman awardee @DanLarremore NIH Pioneer @Sara_Sawyer_, HMMIs, NASs, nobel laureate, and, you know, me! jobs.colorado.edu/jobs/JobDetail…