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⚡️ “Allen Mouse Brain Common Coordinate Framework - Gallery”
twitter.com/i/moments/1371…
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Lydia Ng
1K posts
Lydia Ng
@2queues
Being goofy and enjoying life
Seattle, WA Se unió Haziran 2012
301 Siguiendo422 Seguidores
After 20+ years at @AllenInstitute, I’m retiring. It’s been a privilege to have work alongside so many wonderful scientists, engineers, technicians, PMs and support staff in the pursuit of understanding the brain and sharing data and knowledge with the world.
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Lydia Ng retuiteado
The data involved with this research is freely available to accelerate research and discovery. Browse the SEA-AD Brain Cell Atlas, made possible by a @NIHAging-funded collab with @UWMedicine & @KPWaResearch.
🔗 portal.brain-map.org/explore/seattl…
#studyBRAIN
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Lydia Ng retuiteado
The study, published today in @NatureNeuro, involved over 3.4 million cells from 84 brains. Donors ranged from those with advanced Alzheimer’s dementia to unimpaired subjects without evidence of AD.
#studyBRAIN nature.com/articles/s4159…
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Lydia Ng retuiteado
📣NEXT WEEK! Join us @AllenInstitute for a night of storytelling that take you behind the scenes of Allen Institute science with @han_arbach, Ashwin Bhandiwad, Max DePartee, Rachel Hostetler & Rachel A McCue. 🎟️ Livestream & in-person tickets: ow.ly/skvC50Tannm
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Sharing🤯video to get you through Friday!
Credit: @E_cross_B
@Blender animation of the Allen Mouse Common Coordinate Framework (#CCF). Outer structures "explodes" out to reveal inner brain structures.
@AllenInstitute
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Lydia Ng retuiteado
We've begun rolling out anatomical annotations to the Allen Brain Cell Atlas!
The first data set to support these annotations is the MERFISH Spatial Transcriptomics Dataset of a Single Adult Mouse Brain - registered to CCFv3. 🔗 #AQEBWkkzUlIwRlhMM0hZWEdWRTJTNQACRllZNE9NMkxVNUowWU9GMDdEUgADAQEyTlFUSUU3VEFNUDhQUUFITzRQAAIBQzU3Qkw2Si02Mzg4NTAuNTQAAAQBAAKEpj0EgVyx0wOBCKuDgW6LTwQyTlFUSUU3VEFNUDhQUUFITzRQAAWBr6ZKgemsDoGggUeAktXoBgAHAAAFAAYBAQJGUzAwRFhWMFQ5UjFYOUZKNFFFAAN%2BAAAABAAACDRTVENTWkJYSFlPSTBKVVVBM00ACUxWREJKQVc4Qkk1WVNTMVFVQkcACgALAVRMT0tXQ0w5NVJVMDNEOVBFVEcAAjczR1ZURFhERUdFMjdNMlhKTVQAAwEEAQACIzAwMDAwMAADyAEABQEBAiMwMDAwMDAAA8gBAAAAAgEA" target="_blank" rel="nofollow noopener">knowledge.brain-map.org/abcatlas#AQEBW…
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Lydia Ng retuiteado
Whole, healthy human brain data is now on the ABC Atlas!
Dataset incl. 3 million+ cells sampled from dissections from adult donors. Samples underwent snRNA sequencing and were clustered and categorized by neurotransmitter, region, and more.
ABC Atlas: portal.brain-map.org/atlases-and-da…
GIF
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Lydia Ng retuiteado
⭐New data are available on the Allen Brain Cell (ABC) Atlas
The ABC Atlas provides a platform for visualizing multimodal single cell data across multiple whole-brain datasets simultaneously. #OpenScienceWeek. Visit: portal.brain-map.org/atlases-and-da…
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We are delighted to be working with @awscloud and #BRAINInitiative to create first of its kind cell types knowledge base spanning modalities, species and developmental stages and making these resources available to the research community! @AllenInstitute #studyBRAIN
Adam Selipsky@aselipsky
With @awscloud, the @AllenInstitute is mapping the whole human brain and creating the largest open-source brain cell database in the world. The team is looking to leverage generative AI services like Amazon Bedrock to integrate foundation models into this first-of-its-kind platform to advance treatment for brain disorders. A true example of how #AI and #ML will change lives for the better. aboutamazon.com/news/aws/how-s…
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Congratulations @HongkuiZeng!
Allen Institute@AllenInstitute
Congrats to our own @HongkuiZeng on being elected to @theNASciences! She was chosen for her contributions to society's understanding of mammalian brain cells and connections, and leading the development of #OpenScience data and tools. alleninstitute.org/news/hongkui-z…
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Lydia Ng retuiteado
On this day in 2014, we published the Allen Mouse Brain Connectivity Atlas, the first comprehensive, large-scale data set on how the brain of a mammal is wired. #Allen20
Learn more: reuters.com/article/us-sci…
#NeuroTwitter
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Lydia Ng retuiteado
the only people I’ve seen dismissing this insightful article are ones who don’t seem to understand compression very well
the only surprise(?) is that it took a skilled writer and thinker, instead of one of us researchers, to make the case crystal clear
newyorker.com/tech/annals-of…
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@_JakeVogel_ @AllenInstitute The figure itself is an svg asset. I would like to extract that out and put it on the @AllenInstitute github so you will have source origin to reference
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So glad that our cute little human brain schematic is finding reuse after all this time @AllenInstitute #openscience
Jake Vogel@_JakeVogel_
‼️New preprint‼️ medrxiv.org/content/10.110… Disease progression modeling of: * 3⃣ TDP-43 proteinopathies (ALS, FTLD-TDP, LATE-NC) * Postmortem TDP-43 data from 22 🧠 regions * N = 571 donors We set out to create order from the progression patterns of these 3 proteinopathies? 1/13
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