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SPEC Caltech

SPEC Caltech

@SPEC_Caltech

Single-cell Profiling and Engineering Center, Beckman Institute

Pasadena, CA 参加日 Eylül 2018
50 フォロー中242 フォロワー
SPEC Caltech
SPEC Caltech@SPEC_Caltech·
maximally informative. Her method is very resource efficient, allowing her to compute >1M cells on a fairly typical AWS instance. nature.com/articles/s4358…
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SPEC Caltech
SPEC Caltech@SPEC_Caltech·
Congrats to Xiaoqiao Chen for her first first-author publication today in Nature Computational Science. Xiaoqiao's method assembles small lists of highly informative genes using an iterative SVM method. She uses a clever 'active' strategy to only prioritize cells and genes that
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SPEC Caltech
SPEC Caltech@SPEC_Caltech·
Really excited about this work from @Allan_HPool, showing how missing genes due to intronic reads and poor 3' annotation can be recovered with optimized reference transcriptomes.
Allan-Hermann Pool@Allan_HPool

First Pool Lab pre-print: bit.ly/3yoewcy. We resolve a major pain with 3’ single-cell RNA-sequencing (10x Genomics etc.) – missing gene expression data from thousands of genes. This stems from suboptimal reference transcriptomes and can easily be recovered. T below: 1/12

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SPEC Caltech
SPEC Caltech@SPEC_Caltech·
We are hiring!! Looking to hire a research technician to execute a focused project on exploring human cell surface proteins on the human immune system using single-cell RNA-seq. phf.tbe.taleo.net/phf03/ats/care…
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SPEC Caltech
SPEC Caltech@SPEC_Caltech·
Really cool spatial-sequencing method from UCSF. Have been talking with Eric about this for quite some time... Cool to see it finally in print! XYZeq: Spatially resolved single-cell RNA sequencing science.org/doi/10.1126/sc…
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SPEC Caltech
SPEC Caltech@SPEC_Caltech·
Congrats to all of the authors for a beautiful new paper! We were happy to support the single-cell profiling experiments in this very intriguing EPES synthetic embryo system.
Magdalena Zernicka-Goetz@ZernickaGoetz

My heartfelt thanks for this work to my institution @Caltech @PDN_Cambridge @Cambridge_Uni My wonderful lab @MZG_Lab and especially @BernaSozen_ , my first Caltech PhD student Victoria Jorgensen, my PhD student in Cambridge @BailWeatherbee, and wonderful @sisichen & @zhumeng123

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SPEC Caltech がリツイート
Caltech
Caltech@Caltech·
We are proud to recognize professors Dianne Newman and Jonas Peters for their election to @americanacad. This election is a recognition of "extraordinary people who help solve the world’s most urgent challenges ... and contribute to the common good..." 👏
Caltech tweet mediaCaltech tweet media
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SPEC Caltech がリツイート
Laurien Van Dyck (she/her)
Laurien Van Dyck (she/her)@VanDyckLaurien·
Really enjoyed the talk of Sisi Chen at #RNGS21! The team combines popAlign and multiseq to unravel distinct drug responses in immune cells, leading to exiting yet sometimes unexpected discoveries🤯 😯I will watch out with artificial sweeteners...
Laurien Van Dyck (she/her) tweet media
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SPEC Caltech がリツイート
Sisi Chen
Sisi Chen@sisichen·
So thrillled that our work received the SLAS2021 Innovation award!!! Truly a team effort @SPEC_Caltech with @TamiKhazaei, @cmcginnisUCSF, @ZevGartner, Eric Chow at @CAT_UCSF, Matt Thomson, Jeff Park, and Tiffany Tsou (now grad student at NYU)
SLAS@SLAS_Org

We are pleased to announce Siyu Chen, Ph.D. (@Caltech) as the #SLAS2021 Innovation Award winner, sponsored by @BCILifeSciences. Chen won for her presentation, Defining the Breadth and Specificity of Drug Response in Heterogeneous Immune Cell Populations. 1/2

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SPEC Caltech
SPEC Caltech@SPEC_Caltech·
What's cool: capillary blood sampling devices (TAP devices) allowed them to collect blood at high temporal frequencies (morning and night) to study diurnal variability in a cell type-specific and patient-specific manner.
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