Andy Yates

190 posts

Andy Yates

Andy Yates

@enscore

Genome Technology Infrastructure team leader at EMBL-EBI

EMBL-EBI 가입일 Mart 2013
54 팔로잉296 팔로워
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Rob Finn
Rob Finn@robdfinn·
If you are interested in biodiversity and would like to talk about potential informatics services that would contribute to resources such as @GBIF or @MGnifyDB please reach out to me.
EMBL@embl

Time to accelerate!⏱️ 1 month left to apply for EMBL ARISE2 fellowship program. Are you interested in the development or improvement of technologies on life science research? #ARISE2 trains you to become a future science infrastructure leader. Apply now! embl.org/training/arise…

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Andy Yates@enscore·
Very pleased to see that @ensembl is this week's featured GCBR. A good time to also point towards our latest developments too such as beta.ensembl.org.
GlobalBiodata@globalbiodata

Our featured GCBR of the Week is @ensembl , a genome browser for vertebrate genomes that supports research in comparative genomics, evolution, sequence variation and transcriptional regulation. Click the link to find out more : bit.ly/4dEb3YP @wellcometrust @UKRI_News @EU_Commission @EMBL @NIH @SavetheTasmanianDevil #globalbiodata #openscience

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EMBL-EBI
EMBL-EBI@emblebi·
DECIPHER’s most recent release, v11.24, is now live. Explore the new features and updates added to the platform. ebi.ac.uk/about/news/upd…
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EMBL-EBI
EMBL-EBI@emblebi·
This #RareDiseaseDay we’re shining the spotlight on @deciphergenomic, our database for genetic and phenotypic data which helps further our understanding of rare diseases and improving patient diagnoses. Find out more 👇 deciphergenomics.org
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The DECIPHER Project
The DECIPHER Project@deciphergenomic·
DECIPHER has a new handle! To better reflect our URL and to make it easier to find us, we are now @deciphergenonomic
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ClinGen
ClinGen@ClinGenResource·
Save the Date! The 2024 Curating the Clinical Genome scientific conference will be held in Baltimore, Maryland May 9-10, 2024. CCG24 is co-hosted by ClinGen and @decipher_wtsi. Registration and Call for Abstracts will open in January. clinicalgenome.org/ccg2024
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Ensembl
Ensembl@ensembl·
📢 @GoogleDeepMind’s new AI tool, #AlphaMissense, has catalogued 89% of all 71 million possible missense #variants, predicting their potential to cause disease 🧬 Best part? It is freely available and now integrated as an #Ensembl #VEP plugin! 🥳 ➡️ buff.ly/3WSLpbA
Google DeepMind@GoogleDeepMind

Uncovering the causes of disease is one of the greatest challenges in genetics. 🧬 To help advance this, we created AlphaMissense: an AI model classifying missense variants - or genetic changes affecting proteins. Here's how it can help scientists. 🧵 dpmd.ai/alphamissense-…

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Andy Yates@enscore·
AlphaMissense from @GoogleDeepMind is already available via @Ensembl VEP as a plugin. Another example of an excellent collaboration between them and @emblebi building the previous successes of AlphaFold. Great work by the Ensembl team especially our variation resources
EMBL-EBI@emblebi

The new AlphaMissense catalogue from @GoogleDeepMind can be used with the @ensembl Variant Effect Predictor to predict variant pathogenicity and therefore aid interpretation. ebi.ac.uk/about/news/tec…

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Andy Yates@enscore·
This has been a long road since our PR was opened 4th March 2020. I am immensely proud of the work that's gone into refget from its origins in the CRAM Reference Registry to now as a foundational standard in genomics. Thank you to all who have contributed
GA4GH@GA4GH

It's official: #refget v2.0 is the next GA4GH standard. bit.ly/3XTm4z1 This API for reliably finding the right reference sequence powers all #CRAM files. v2.0 users include GA4GH VRS, @ENASequence, and soon @ensembl. Thanks to @emblebi's @tcezard & @enscore and the team!

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Andy Yates@enscore·
A huge amount of work has gone into making the move from the Wellcome Sanger Institute to EMBL-EBI. We are proud to have such a powerful and well used service now part of our portfolio. Congratulations to all at EMBL and Sanger who made this possible.
EMBL-EBI@emblebi

The DECIPHER project is joining EMBL-EBI! DECIPHER is a powerful data resource for the diagnosis and discovery of rare diseases. By moving to EMBL-EBI, the project will develop through support from our data management experts. ebi.ac.uk/about/news/ann…

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Andy Yates@enscore·
All of the pangenomes are available for access through our Rapid Release @ensembl portal including T2T (rapid.ensembl.org). We are all exceptionally proud at Ensembl to be part of this new phase of global efforts to better understand human diversity
EMBL-EBI@emblebi

Genomes differ slightly among individuals and so using one standard reference genome has limitations. Researchers from @HumanPangenome have released a more complete collection of genome sequences – the human pangenome – to better capture human diversity. ebi.ac.uk/about/news/ann…

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@GBIF @MGnifyDB @ensembl @wellcometrust @UKRI_News @EU_Commission @EMBL @NIH