Kim Pruitt
1.2K posts

Kim Pruitt
@kdpru
Scientist manager of data resources. My roots are genetics, genomics, and annotation. Opinions expressed are my own.
Maryland, USA 가입일 Şubat 2010
422 팔로잉385 팔로워

A historic village in western North Carolina is under water after bearing the brunt of devastating flooding damage from Hurricane Helene. nbcnews.com/news/us-news/a…
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@nikoliasgoninus I’m so sorry to see this 😟 I love western NC, family is from that general area. I hope you have enough supplies while waiting for help! Be safe…
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Shame on you @NBCNews for televising national nightly news video of south Florida flooding showing a woman with her skirt hitched up so high you could see her underwear. Please show more respect for women.
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It is thrilling and overwhelming to share that I've been named to the #TIME100HEALTH list! It is humbling to be listed among such luminaries. I can't wait to see where #WastewaterSurveillance takes us next.
time.com/6966800/amy-ki…
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NCBI worked with Industry and Academic Partners as part of the @NIH ACTIV TRACE program to identify ways to ensure variant calling results are consistent across workflows. Details are in our NEW PUBLICATION: mdpi.com/1999-4915/16/3…

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NEW BLOG: How do NLM products and services keep up with changing user needs, increasing data volume, new interface capabilities, and the changing cybersecurity environment? Read more about how we strive to embrace continuous innovation. 💡 loom.ly/xO8gp5Q
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New NCBI publication! Learn about FCS-GX, part of NCBI’s Foreign Contamination Screen (FCS) tool suite, optimized to identify and remove contaminant sequences in new genomes: ow.ly/UX0r50QIkSa #NCBICGR

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Read about @NLM_NIH NCBI's latest research on gut microbial metabolism and our findings 👇
Xiaofang Jiang@jiang_bioinfo
💡Check out our exciting discovery in gut microbial metabolism! Our latest work reveals a gut bacterial enzyme, bilirubin reductase (bilR), closing a critical knowledge gap in the heme degradation pathway. Out today in @NatureMicrobiol! A short 🧵: nature.com/articles/s4156…
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Visualize the relatedness of many protein sequences from a particular genome using the #NCBIBLAST Tree View! For example, all sequences similar to IMA1 in a specific yeast species. Learn how you can use BLAST and other #NCBICGR resources: ow.ly/3ArB50PZ3X5

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@lpachter @michaelhoffman @lpachter this is also the process for GenBank and SRA. ncbi.nlm.nih.gov/sra/docs/seque…
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One of the great things about GEO is that a private accession can be "freed" when it is mentioned in a published paper- learned this from @michaelhoffman. Submitted another request today for data that would otherwise have been hidden until 2025. I wish I didn't have to do this.
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You asked, we listened! We are pleased to announce that you can now search for a gene in our Comparative Genome Viewer (CGV) and navigate directly to its location in the viewer. Learn more 👉ow.ly/CL7x50M2g90 #NCBICGR

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We look forward to seeing you at #PAG30! Check out our full schedule of activities 👉 ow.ly/CVi350LYK3A #NCBICGR
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Announcing the SARS-CoV-2 Variant Calling Pipeline! This new analysis pipeline can uniformly process raw sequence data produced by various sequencing platforms. Learn more 👉 ow.ly/UAB250LSTaa

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Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance biorxiv.org/content/10.110…
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Kim Pruitt 리트윗함

Did you know ElasticBLAST can search 28 NCBI-provided databases? Try it out! Learn more here: ow.ly/CmSv50Kw3sa #NCBIBLAST #CloudComputing

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Join NCBI at #ASHG22! Learn how you can use NCBI resources to research genetic diseases and conditions. More info 👉 ow.ly/ExQ450L8bCy

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A new version of PGAP is available! This version estimates the completeness and contamination of your PGAP-annotated genome assembly. Learn more: ow.ly/6jJF50L9bAH
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