Benjamin Sanchez

wow that flag rendered larger than what I expected😅

Are you soon to become unemployed, live in Sweden but speak no Swedish? If so, I wrote a handy guide for getting that sweet unemployment money, check it out here: benjasanchez.com/post/2020/04/s…

A pre-print from work I did in my PhD together with @LahtveeLab @IVANDOMENZAIN @AZelezniak @ask_jens and other talented researchers is now out. I hope it will be useful for anyone out there working with absolute proteomics data doi.org/10.1101/2020.0… #researchFromHome

@JLMart81 el hecho de que hayas vivido 2 años con 4967 correos me asombra y me asusta 😅

2 papers were published this wk using my code(written for those projects) w/o credit PIs - it's not enough to be kind&hire kind people. You must actively model&teach integrity. Students can be blinded by their own Herculean efforts&not see other's sml but essential contributions

@ensembl hi! do you expect the end date of this transition to be affected by the COVID-19 crisis?

⚠️ We are now entering a period of reduced functionality for some #Ensembl services, including #VEP, #BLAT and the #FTP site between 10th-25th March ⚠️ Read our blog to find out more information and tips for reducing the impact on your work: buff.ly/2HM02YR

Denmark is closing. All non-vital public institutions are shut down. Gatherings +100 are forbidden by law. More to come. Holy crap. #COVID19 #COVID19dk

We are facing a crisis, but no food shortage. Please do NOT hoard. Salling Group, Coop, Dagrofa, and Rema 1000 confirm there is no food shortage. #dkpol #COVID19dk

Would I get COVID-19 if I haven’t seen the first eighteen of them?

@nickeatingpizza Noted! Thanks for noticing :)

@BenjaSanchez nice night mode! FYI: dark blue href elements in the CV are hard to read on the dark grey background 😉

Hi Twitter, I have a website now: benjasanchez.com atm is more of an online CV, but 1) you can read informal summaries of papers I've co-authored from my exclusive POV and 2) expect sporadic posts about random things I find interesting 😉👨‍💻🚀

@brewedlondon @SteamSquirtle @HelenBOPM @eaxford There're like 3 seats left... we need new dates!!!

@SteamSquirtle @HelenBOPM @eaxford Thanks for the tip!!!

We’re headed to the UK binchhhh livenation.co.uk/artist/not-ano…

Today on valentine's day, I wanna give a shout-out to the one I've been thinking about non-stop for the past months, and whose mere sight keeps me restless at night: my PhD thesis #PhDlife #HappyValentinesDay🔜👨‍🎓🏖️

Ho-ly-guac, that was an intense episode! BoB please be more careful and forever thank Apple Scrumper #NADDPod (PS can highly recommend this podcast)

News from my flagship project: GECKO v1.3 is out, and it includes a revamped protein flexibilization algorithm for automatically integrating proteomics data into GEMs. Check out more at: github.com/SysBioChalmers…

Our latest work on genome-scale model reconstruction, funded by #DDDecaf, is now online on NAR: academic.oup.com/nar/advance-ar…

More improvements to the cutting edge version controlled GEM of S. cerevisiae: yeast 8.1.0 brings a new way of constraining lipid metabolism + full compatibility with SBML @DDDeCaF @sbmlnews github.com/SysBioChalmers…

New pre-print out: this time addressing lipid requirements in the biomass pseudoreaction, a big elephant in the room of metabolic modeling. Comments on the manuscript or SLIMEr, the companion software, are very welcomed! @DDDeCaF biorxiv.org/content/early/… github.com/SysBioChalmers…

@willigo09 @dplattsf @me_beber @ChristianLieven @DDDeCaF If you load the model with loadYeastModel.py you should not have any problems (that's the workaround we have for now, see github.com/SysBioChalmers…). We have an open issue to solve the inconsistent formulas, see github.com/SysBioChalmers…

@BenjaSanchez @dplattsf @me_beber @ChristianLieven @DDDeCaF Thanks for your efforts! I might look at the wrong file, but I still see all those __91__ etc. (but easy enough to "fix" myself). More important: the online sbml validator says it's invalid; problem seem to be the parentheses in chemical formulas.

yeast-GEM 8.0.2 is now released! Compatible with cobrapy, after popular demand @dplattsf @willigo09 @me_beber @ChristianLieven @DDDeCaF github.com/SysBioChalmers…