BioImage Archive

🚨 Save the Date! 🚨 AI4Life & @GloBIAS_ are hosting a 4-part webinar series to showcase AI4Life services and lessons learned. 📅 When: Feb 13, Apr 10, Jun 12, Aug 14 🖥️ How: Online | 🎥 Recorded 🔗 Registration: bit.ly/registration-g…

Deadline extension alert! You now have until 19 January to apply for this course that will show how public bioimaging data resources, centred around the @BioimageA, enable and enhance machine learning based image analysis: ebi.ac.uk/training/event…

Join our wonderful team at EMBL-EBI! We are hiring a data steward with #microscopy experience. You will get to collaborate with scientists and provide training to address the imaging community needs in data management #BioImaging #DataSteward embl.org/jobs/position/…

You can now find us on @bluesky! bsky.app/profile/bioima…

Looking for a recipe for depositing bioimage #data in the @BioimageA? Check out the step-by-step process developed by #EuroBioImaging's FAIR Image Data Steward published in @ELIXIREurope's #FAIRdata Cookbook⤵️ faircookbook.elixir-europe.org/content/recipe…

Wrapping up a fantastic week at the #BioHackEU24 🎉 Project 17 worked (also) on the future integration of @BioimageA and @bioimageio with #useGalaxy, which will enable automatic import of both images and #AI models, streamlining automated #ImageAnalysis workflows.

Starting the second day of the #foundingGIDE meeting in Okazaki, Japan. All about metadata, data models and ontologies and why we need them:

Day 1 of the #foundingGIDE Community Event wrapped up with a dynamic panel on open science and image #DataManagement. Representatives from @EuroBioImaging, @UNESCO, @NIG_idenken, @EMBL, @emblebi and @zeiss_micro discussed data accessibility and #Interoperability in #bioimaging

Life scientists! The 3rd (and last) AI4Life Open Call is officially open! 🎉 We are offering deep learning support for bioimage analysis. Apply now! 🔗 ai4life.eurobioimaging.eu/third-open-cal… ⏳ Deadline: December 10, 2024 @REA_research #AI #Bioimaging #Imaging #ImageAnalysis #DeepLearning

#foundingGIDE Community Event is ON 📢 hosted by @riken_en in Okazaki 🇯🇵 Looking at 1.5 days full of insights into how we as a community can enhance image data #interoperability, harmonizing #metadata and #ontology to lay the foundations of a Global Image Data Ecosystem #GIDE!

How can you take your data one important step closer to #FAIRdata 🤔? Check out #EuroBioImaging's FAIR image data decision tree🌳- designed to guide you in the selection of appropriate repositories. Separate trees exist for different image data types! Check it out⤵️ zenodo.org/records/139451…

We're thrilled to be contributing to the new Human Protein Atlas release (full of new features!) by making over 10 million raw images accessible to all🌐Dive in to this expansive - 300 TB- image dataset that helped unlock insights into human protein expressions! #OpenScience

If you didn't yet have enough good reasons to share your bioimage data, Matthew (@BioimageA), Josh (@notjustmoore), Erin (@tuesdaystitches), Assaf (@AssafZaritsky) and I are here with squirrel drawings to convince you that you should do it: journals.biologists.com/jcs/article/13…

@BioimageA is a key partner in AI4Life, contributing significantly to the standardization of metadata for AI-ready datasets—a highly relevant topic in the bioimaging community! 🔥 Check out the preprint that details this work: arxiv.org/abs/2311.10443

Today we showed how we are making our #AI-ready datasets #FAIR at the @AI4LifeTeam general assembly at @humantechnopole!

There’s still time to join tomorrow’s #webinar to discover the utilisation of #WebAtlas and @BioimageA in visualising #spatialtranscriptomics and imaging data. Registration is free but essential: ebi.ac.uk/training/event… #singlecell #DataScience @sangerinstitute @bayraktar_lab

📢Frontiers in Bioimaging 2024: Book now! Don't miss this great meeting, focusing on latest developments in both optical and electron microscopy, as well as image analysis. Register now: rms.org.uk/rms-event-cale…

El periodo de aplicaciones ha iniciado. Aplicaremos mejores prácticas en el uso de recursos públicos de bioimágenes, como @BioimageA e #IDR, dando pie al análisis de bioimágenes utilizando metodologías basadas en aprendizaje automático 🍃🐭🦠🐠🔬🖥️⌨️🤖

Join our #webinar next week to discover #WebAtlas, a tool for visualising #SpatialTranscriptomics data and #BioImageArchive, an #OpenAccess data archive for biological imaging data. Registration is free but essential: ebi.ac.uk/training/event… #singlecell #spatialomics #DataScience

What an amazing project 🤩! With BY-COVID, we mobilised multiple valuable COVID-19 image datasets to @BioImageA, who implemented recognition for the important role of Data Stewards towards sharing #FAIRdata. Check out all the project outcomes in this beautiful brochure ⤵️