Damian Hernandez

133 posts

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Damian Hernandez

Damian Hernandez

@DamianMicroEco

Microbial Ecologist | NSF PRFB Fellow | University of Toronto, Stinchcombe Lab | VU Amsterdam, Kokkoris Lab

Katılım Ağustos 2019
165 Takip Edilen157 Takipçiler
Damian Hernandez retweetledi
John Stinchcombe
John Stinchcombe@JohnStinchcombe·
I am interested in recruiting PhD students in the area of plant ecological genetics! Potential topics include ecological genomics in Arabidopsis, morning glory, or ragweed; plant-microbe interactions; or new topics at the intersection of quant gen and pop gen.
Asher Cutter@asherdcutter

PhD and MSc application portal @eebtoronto opens tomorrow Nov 1! Check our outstanding faculty and research for open positions! Toronto is a great place to be eeb.utoronto.ca/education/grad… eeb.utoronto.ca/people/faculty/ eeb.utoronto.ca/research/

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Mark Hibbins, Great Lakes Swashbuckler
Mark Hibbins, Great Lakes Swashbuckler@reject_resubmit·
I'm recruiting students / postdocs to join my new lab at the University of Rochester for Fall 2025 onwards! If you're interested in phylogenetic comparative methods, genome evolution, and/or computational biology, please get in touch! More info: mhibbins.github.io
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
@PoppyBest3 @fantaschy I think that will be the next plan. Right now I'm cavemanning it and running this analysis in serial on different cores instead of parallelizing (I think there's a bug in the dependency tree for how the parallelization is set up)
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
Building environments for genome analyses will be the end of me. Setting these up is taking longer than actually doing the analyses.
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
@fantaschy Unfortunately, I think conda might be the problem in this case 🥺
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Natascha Varona
Natascha Varona@fantaschy·
@DamianMicroEco Bioconda has been my savior! But whenever that’s not an option it takes forever (or not at all if your server doesn’t give you root access)
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
@HunterH0well You legit rebuilt a whole model system for herp ecology from scratch in 5 years in some of the toughest field conditions I can imagine. I would have lasted 5 seconds out there.
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
I’m happy to say that my last dissertation chapter is now out as a preprint! We find that expanding gene families are essential for context-dependency of arbuscular mycorrhizal (AM) symbiosis. biorxiv.org/content/10.110… 1/8
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
A big thanks to my co-authors: the excellent undergrad (now post-Bac) Gwendolyn Pohlmann and my PhD advisor @MichelleAfkhami for all their help and for translating the jumbled mess in my head into a cohesive storyline! 8/8
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Damian Hernandez
Damian Hernandez@DamianMicroEco·
We hope this inspires new ways of thinking about how context-dependent regulation evolves and helps use the evolution of complexity as a way to discover new mechanisms of context-dependent control of interactions. 7/8
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Damian Hernandez retweetledi
Lotus Lofgren
Lotus Lofgren@LotusLofgren·
Out this morning! Where we argue the need for genus-level model systems in fungi and why Suillus should be one of them, provide a primer on the genus, and how the International Suillus Consortium is addressing grand challenges to system development.  doi.org/10.1111/nph.19…
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Keşfet

@JohnStinchcombe @ME_Frederickson @Ecology_Letters @BriannaAlmeida4 @NewPhyt @elantrann @fantaschy @HunterH0well