The FORVM Knowledge Graph

The FORVM Endpoint was unavailable but is now up and running 🛠 Sorry for the inconvenience!

Come and chat with us! #metsoc2022 #Valencia #metabolomics #MetExplore #FORVM #SAMBA #MetClassNet

Thanks for the shoutout!😊 #MetSoc2022

@FORUM_Metabo thanks also FloVinson for REST API, fuzzy algo and database dump + ChrisDuperier for IT and off course @DelmasMaxime1 and @clement_frainay in charge of the new Metabolism Knowledge Network release. #metabolomics #semantics #greatTeam #MetaboHUB

The interface also provides immediate access to supporting literature for each chemical-disease relationship

The website also changed, it is now possible to filter results using the MeSH thesaurus hierarchy

The FORVM new release is here 🥳: we updated and enriched our datasets and added new features to the web interface!! 🧵

Due to the yearly digital certificate update, there has been a service interruption. The FORUM website is now operational; in the event of an error or warning, please clear your browser's cache. We wish you a happy new year 2022!

Problem solved!🥳 the FORVM website is now up and running

We are having technical difficulties with our web-app and are actively working on a fix 🛠️. The FORUM SPARQL endpoint is still reachable and running. Sorry for the inconvenience!

Pleased to announce that the Forum #KnowledgeGraph article has been published in Bioinformatics. Read on to find out how to tap into a network of millions of statements to investigate links between between small molecules and diseases academic.oup.com/bioinformatics…

@phelanlab Thanks! This list can only be retrieved with sparql for now, we're planning to ease this extraction in the next release

@egonwillighagen @pubchem @chebit @MetaNetX_org @umakayummy Yes, everything can be downloaded or built from source. FORUM triples come without any licence restrictions. We are updating the website to make things clearer and link to external resources licensing agreements.

This is the first release of the FORUM webapp! 🥳 Time to do some literature analysis from #metabolomics data at forum-webapp.semantic-metabolomics.fr/#/about Follow for next releases and updates

We built a knowledge graph using #RDF data from @PubChem #PubMed @chebit @MetaNetX_org and #MeSH to allow biomedical concepts enrichment from metabolomics data. Find more about our method at doi.org/10.1101/2021.0…

☝️Collaborative work between @INRAE_Tlse, @INRAE_Clermont and @INRAE_BzhNdie, with also support from @Metabohub and @beating_goliath