Giotto

Thrilled to announce our new Nature Methods paper: Giotto Suite: an extensible, technology-agnostic ecosystem for spatial multiomics analysis. Big thanks to co-first authors @jiaji_g_chen & @josschavezf1, and all Giotto devs in @RnDries & @gc_yuan labs! nature.com/articles/s4159…

Our team will be doing a hands-on workshop in August and showcase both basic and advanced spatial omics data analysis!

Our website also includes many other examples from spatial technologies and datasets that we couldn't all highlight in our manuscript, but that are certainly worth exploring, including @SpatialGenomics, @nanostringtech #CosMx, #SeqScope, #DBiTseq and others

For more information you can visit our website at giottosuite.com. We are working very hard to further improve the website and add additional vignettes, and also lots of practical information for both first-time users and external developers.

Dear spatial afficionados, check out our latest contribution to the spatial data analysis landscape. In this work we present Giotto Suite, our completely new ecosystem designed to work with the most exciting and challenging spatial datasets. biorxiv.org/content/10.110…

Last minute deals! I will be giving a major update on Giotto Suite at 11 am today (!) for the VUES on Spatial Biology group. Please, share with anyone interested. Registration required: harvard.zoom.us/webinar/regist… More exciting updates will follow very soon!

Three members of our team presented Giotto Suite (v3.3.1) at the annual @Bioconductor meeting in Boston! The presentation and demo code can be found at github.com/drieslab/Giott…