Francesco Andreace
33 posts

Francesco Andreace
@frnandreac
PhD Candidate ALPACA 2020 ITN Sequence Bioinformatics @institutpasteur Paris Human Pangenomics Views are my own
Katılım Mayıs 2022
160 Takip Edilen88 Takipçiler
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New preprint alert! 🚨
Our latest work on plasmid mobility with @epcrocha & @NucciAmandine is now available.
Identification of novel origins of transfer across bacterial plasmids.
Read the full paper here:
biorxiv.org/content/10.110…
Thread🧵below!
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Two days ago I had the honor to take a coffee with Dr Anthony Fauci before his keynote lecture on 40 years of HIV at @institutpasteur, together with other 9 selected phd students and postdocs. It was a privilege to ask him questions about policymaking and pandemic preparedness


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Pangenome graphs are a powerful tool: choosing the right one for your application is paramount. Have a look at the characteristics of state-of-the-art tools! The reviewed article is now published on Genome Biology! genomebiology.biomedcentral.com/articles/10.11…
Francesco Andreace@frnandreac
The construction of large cohorts human pangenome graphs is a challenging task. We selected 5 different state-of-the art tools that generate variation graphs or De Bruijn graphs and used them to construct a human pangenome of 104 high-quality human haplotype assemblies. (1/4)
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It is now available on Genome Biology! genomebiology.biomedcentral.com/articles/10.11…
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Here you can find the preprint: biorxiv.org/content/10.110… .
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The construction of large cohorts human pangenome graphs is a challenging task. We selected 5 different state-of-the art tools that generate variation graphs or De Bruijn graphs and used them to construct a human pangenome of 104 high-quality human haplotype assemblies. (1/4)

bioRxiv@biorxivpreprint
Construction and representation of human pangenome graphs biorxiv.org/cgi/content/sh… #bioRxiv
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Super thread by @camiladuitama1 on her PhD journey and the metagenomics methods she developed! If you are interested in ancient metagenomics contact her! She is super cool and can give you nice books recommendations as well!
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