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Danila
114 posts
Danila
@gtcaa
• Multimodal genomics @Stanford w/ @anshulkundaje & @jengreitz • Steering council & core dev @scverse_team 👾 • @EMBL alumnus PhD w/ @OliverStegle @StatGenomics
Katılım Ekim 2017
1.3K Takip Edilen468 Takipçiler
@TuXinming @anshulkundaje @pkoo562 Thanks for joining this collaborative endeavor!
Looking forward to working together on the next releases 👀🚀
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Fun fact: I actually hacked together an early PyTorch port of AlphaGenome using Claude/Codex before, but this collaborative release is on another level—so much more robust and infinitely easier to use!
🚀 Huge thanks to @anshulkundaje and @pkoo562 for inviting me to join forces. Thrilled to contribute to this amazing team effort! 🧬
Alejandro Buendia@abuen_dia
Thrilled to announce alphagenome-pytorch, an accurate, readable, and careful port of AlphaGenome's architecture and weights to PyTorch. Work with @gtcaa @m_kjellberg @chriswzou @tuxinming as part of the GenomicsxAI initiative between @anshulkundaje and @pkoo562 labs.
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Danila retweetledi
Can AlphaGenome, which considers 1 megabase DNA as input, be finetuned on short DNA sequences from MPRAs (~200bp)?
@Al_Murphy_ shows this approach can lead to state-of-the-art performance on lentiMPRA!
Check out the companion blog post:
genomicsxai.github.io/blogs/2026-002/
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Danila retweetledi
It’s rare to have the core of innovation in one place, but the scverse conference 2025 made it happen.
@officialbiohub x @nvidia x @scverse_team : three forces, one room, endless acceleration.
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@scverse_team and if you're interested in joining online, make sure to grab a ticket as the sale ends soon!
x.com/scverse_team/s…
scverse@scverse_team
We're pleased to announce that we are now offering online attendance via Zoom. Remote attendance is available for 30 USD, and you can secure your spot by registering at eventbrite.com/e/scverse-conf…. We hope to see you online at the conference!
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after the excitement of our first @scverse_team conference last year, we knew we had to do it again this year — this time in the bay 🌁
it's going to be more than just talks and posters, so make sure to grab a ticket 👾
x.com/scverse_team/s…
scverse@scverse_team
🎉 scverse conference 2025 Registration & Call for Abstracts NOW OPEN! 🎉 We're excited to announce that registration and the call for abstracts are officially open for the scverse Conference 2025! Details in thread! 🧵 1/3
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While the conference is underway, business as usual!
scverse@scverse_team
We will have our next community meeting on Tuesday, 2025-10-14 at 18:00 CEST! Yimin Zheng will be presenting on LazySlide, a Python framework for whole slide image (WSI) analysis. (Zoom registration link and more information in thread!) 🧵
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The next edition of the scverse conference is going to be later this year — mark your calendars and keep an eye on the announcements in the next few months!
It's coming to the bay! 🌁
scverse@scverse_team
📣 Mark your calendars! The 2025 edition of the scverse conference will take place on 17-19 November at Stanford University (US) scverse.org/conference2025/ Call for abstracts and registrations coming soon!
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