MS-DIAL

#MSDIAL5 is currently under intensive development 👨‍💻 It will cover #metabolomics #lipidomics #proteomics including all new types of fragmentation mechanisms 💥 such as EAD or OAD and much more! What do you think the new MSDIAL should contain? Are you missing any functionalities?

We are excited to introduce a novel MS2 data processing workflow that extends the capabilities of metabolomics and lipidomics through ZT Scan DIA 2.0. Details are now available in our preprint: 🔗 biorxiv.org/content/10.110… #metabolomics #lipidomics #massspectrometry #msdial

🌐 Explore our lab's research: systemsomicslab.github.io/en/ Special thanks to @czi and @ss_f_official!!!!

This unique program supports postdoctoral researchers aiming to conduct groundbreaking research in bioengineering and biomedical science, fostering global collaboration between Japan and the U.S.

🌟 Exciting Postdoctoral Fellowship Opportunity! 🌍🔬 We are thrilled to announce that the Hiroshi Tsugawa Lab is proud to serve as a host lab for the prestigious CZ Biohub Global Science Scholars Program! czbiohub.org/program-ssfcz-… Pls circulate!

Here is the preprint of our latest research using SWATH-DIA-EAD-MS/MS for FAHFA profiling. biorxiv.org/content/10.110…

Here is the summary. Lipids are complex molecules crucial for life. MS-DIAL 5 enhances in-depth structure elucidations and the spatial mapping of lipidome. Using advanced techniques, we uncovered new insights into the biosynthetic pathway of eye-specific phosphatidylcholines.

The official paper of MS-DIAL 5 is now available online. We appreciate your feedback to make the MS-DIAL project for metabolomics/lipidomics data management more shiny! nature.com/articles/s4146…

Here is our latest preprint showing MS-DIAL 5 environment to illuminate lipidome complexities with multimodal mass spectrometry data. biorxiv.org/content/10.110…

We uploaded the latest version of ms-dial5/msfinder at the riken prime webpage. prime.psc.riken.jp/compms/index.h… See the detail at github.com/systemsomicsla…

🥁 Drumroll please! 🥁 We're thrilled to announce the Contributors for Google Summer of Code 2023 👉 goo.gle/3nqCiBW This year's application period includes: ⭐ 43,765 applicants from 160 countries ⭐ 7,723 proposals submitted ⭐ 967 GSoC contributors accepted

We have published our Google Summer of Code proposal template and encourage you to start filling it out. github.com/MZmine-MS-DIAL…

We have posted a video on youtube.com/watch?v=5eDAsI… to help you build your own MS-DIAL5,4, and MS-FINDER. This would be especially helpful to those interested in contributing to our Google Summer of Code project. summerofcode.withgoogle.com/programs/2023/…

MZmine (@mzmine_project) and we have added a link to GitHub Discussions for our Google Summer of Code ideas to mzmine-ms-dial-gsoc.github.io (It is under section "Project ideas"). If you prefer open discussion, please feel free to comment the ideas in github.com/MZmine-MS-DIAL… .

@dakshatt @kozo2 @dakshatt not yet, but our team started the development of GC-MS part recently, and will provide the first release ASAP.

@msdial_project @kozo2 Does v5.x have GC module activated?

MS-DIAL team uploaded the latest version of ms-dial 5 (5.1.230222). Also, our team put the source code on the github by the help of @kozo2 Kozo Nishida and Yuki Matsuzawa! github.com/systemsomicsla…

MS-DIAL and @mzmine_project will participate in #GSOC 2023! If you have some experience with #massspec and if you like #coding to solve problems in #massspec #metabolomics #lipidomics is your thing: read summerofcode.withgoogle.com/programs/2023/…

prime.psc.riken.jp/compms/index.h… Check 5.1.23022 out

Hi ms-dial users: We released the latest version of MS-DIAL 4/5 today. Many features in MS-DIAL 5 were updated, and the lipid nomenclature systems were modified in both 4/5 programs to follow the definition of LIPIDMAPS. prime.psc.riken.jp/compms/index.h…

As a tutorial of ms-dial 5, we prepare youtube videos here. This does not contain the tutorial of all functions yet. Please let us know what you need in the tutorial, and we will prepare it asap! @msdialproject/videos" target="_blank" rel="nofollow noopener">youtube.com/@msdialproject…

In addition, we would like to announce our latest preprint showing a lipidome landscape of aging in mice where MS-DIAL 4 series (having enhanced lipidomics database) was used. researchsquare.com/article/rs-213…