RNA-Puzzles

Cross-species integration of single-cell RNA sequencing data just got easier! Learn more about a new openly available pipeline that could help you identify optimal strategies for analysing single-cell RNA sequencing data across different species. nature.com/articles/s4146…

We are happy to announce that we will have a new regular puzzle (PZ40) release on 2 pm (CEST/GMT+2) Tuesday 11th April 2023. rnapuzzles.org/open-puzzle/

@qvicens @CUAnschutz @Jayquerido @UMLifeSciences @umichrna great to see you two in the same photo after several years!👍

Great visit to @CUAnschutz by the awesome @Jayquerido from @UMLifeSciences @umichrna - thanks for coming!!

It is a great pleasure to have Prof. Runsheng Chen as our first speaker in 2023 Guangzhou RNA club. The seminar will be held at 15:00PM 2023-01-04, available at Voov meeting: 177-967-139 and Bilibili live.bilibili.com/26427894. Thanks to Epibiotek, Benagen and RNA society.

[RNA-Puzzles result release] We have now released the prediction results of PZ16, PZ31 and PZ32.

We have two open super exciting positions in CRISPR design. Check them out here: PhD: employment.ku.dk/faculty/?show=… Postdoc: employment.ku.dk/faculty/?show=… Deadline: Dec. 18, 2022.

We are happy to announce that we will have a new regular puzzle (PZ38) release on 2 pm (CET/GMT+1) Wednesday 30th Nov 2022. The automatic webservers will have 48 hours for prediction, while human experts will have 3 weeks for prediction (the deadline is 21st Dec 2022.

We are happy to release the prediction results of PZ34 (MTR1): rnapuzzles.org/blog/2000/01/0….

We are happy to see R2DT used in more places!

We are happy to announce that we will have a new regular puzzle (PZ37) release at 2 pm (CEST/GMT+2) Thursday 20th Oct 2022. Please register with ibmc.cnrs@gmail.com if you are interested.

Are you familiar with @galaxyproject but looking to learn from the experts themselves? Join like-minded peers from 6 – 10 February and find out how to apply #Galaxy to #singlecell #RNAseq analysis. 🔗Find out more, and apply for this virtual course: ebi.ac.uk/training/event…

We have got several postdoc positions and a co-PI position available in our lab in Guangzhou. rnacentre.org. @RNAPuzzles @rna_club

Ribocentre is designed to contain comprehensive information of all natural ribozymes. Ribozymes are good systems for understanding the ‘sequence - structure - function’ relationship of RNA molecules.@lilley_mj ribocentre.org doi.org/10.1093/nar/gk…

Cell type discovery has never been easier. @chichaumiau and colleagues in our Brazma Group, the @ExpressionAtlas and the @teichlab @sangerinstitute have published a new method to identify cell types with #MachineLearning @naturemethods #CellType ebi.ac.uk/about/news/ann…

Read more about this new method, Single Cell Clustering Assessment Framework, in @naturemethods 👇 @teichlab @chichaumiau @ExpressionAtlas nature.com/articles/s4159…

🔎Identifying cell types from single-cell #RNAsequencing data is now more efficient than ever, thanks to this new method from @emblebi and @sangerinstitute researchers sanger.ac.uk/news/view/auto…

SCCAF automates the discovery of putative cell types and their feature genes using scRNA-seq data. nature.com/articles/s4159…

Please find our paper describing the computational tools for RNA 3D structure and the benchmark set from RNA-Puzzles. academic.oup.com/nar/advance-ar…

@DeepMindAI Hello, I am organizing RNA 3D structure prediction. I would like to ask if this approach can also be applied to RNA. Many of the RNA do not have good MSA available.

Using AI to help scientists solve big questions is at the core of DeepMind’s mission. Today we’re delighted to announce our first significant milestone: a successful application of machine learning to the protein folding problem. deepmind.com/blog/alphafold/ #AlphaFold (1/5)