Mingfu Shao

Sequence analysis has long relied on combinatorial optimization, but recently have seen rapid progress driven by ML and AI. Algorithms for Molecular Biology is now inviting submissions on this exciting frontier. Deadline: Feb 16, 2026; more info: bit.ly/4koHZrF

@jmuiuc @oanacarja @YunWilliamYu @CMUCompBio @SCSatCMU Congratulations!

Congrats to my colleagues @oanacarja's NSF CAREER cs.cmu.edu/news/2025/carj… and @YunWilliamYu's NIH MIRA cs.cmu.edu/news/2025/yu-m… 🎉their work exemplifies CMU comp bio: innovative & distinct methodology grounded in biological applications with real impact. @CMUCompBio @SCSatCMU

@GarmireGroup, Joshua Levy (Cedars-Sinai) and myself are organizing a workshop on "Advances of AI methods in single cell spatial omics" at PSB2026. Check out our workshop website to submit an abstract: sites.google.com/view/ai-spatia…

Looking forward to seeing you in Liverpool!

Looking forward to it!

Abstract submission deadline of GLBIO 2025: the coming Monday (March 3rd). Check out the amazing lineup of keynotes: iscb.org/glbio2025/prog…

If you’re looking for a chance to share your research, #GLBIO2025 is the perfect opportunity! Submit your abstract by Monday, March 3 📥Click here to submit: s.mtrbio.com/rbfbyomaeg

🔔Don't forget! Proceedings papers for #GLBIO2025 are due Monday, February 3! 📥Submit here: t.ly/T1MOI

🚨 Keynotes at RECOMB-seq 2025! 🚨 🌟 Alicia Oshlack – computational transcriptomics @AliciaOshlack 🌟 Rayan Chikhi – sequencing data structures @RayanChikhi 🗓️ Dates: April 24–25, 2025 📍 Seoul, South Korea recomb-seq.github.io/speakers/

check out GLBIO 2025: proceedings submissions due Feb 3, 2025. Proceedings papers will be published in Bioinformatics Advances.

🚨 Call for Papers: RECOMB-seq 2025 🚨 🗓️ Dates: April 24-25, 2025 📍 Location: Seoul, South Korea Key deadlines: 🔹 Abstract registration: Jan 24, 2025 🔹 Submission: Jan 31, 2025 More details: recomb-seq.github.io/papers/

@PennStateEECS Congratulations Rui!!

NSF CAREER award: Centering people while advancing artificial intelligence Computer science researcher Rui Zhang to build user-friendly data summarization system ➡️ bit.ly/3YqJNY7

Penn State CSE is hiring in all areas! Feel free to let me know if you have any questions. academicjobsonline.org/ajo/PennState/…

Calling all brilliant minds! The CSE department at Penn State is looking for the next generation of faculty trailblazers. Join us for inspiring research, top-notch facilities, and a community that’s as driven as it is welcoming. Your next adventure starts here! @PennStateEECS

@curious_coding @IgorMartayan @pashadag talks won’t be recorded; hope you could join for future workshops!

@IgorMartayan @shaomingfu @pashadag Seconding both the great schedule and the request for recordings ;) Would have attended if it wasn't across the ocean.

Check out the incredible lineup of talks at WEMSA 2024: ccbb.psu.edu/workshop2024/. There is still time to submit posters by 7/20/2024 via forms.gle/S1D5Uy1rLmfwB4….

Last year, a lot of people seemed to appreciate a cleaner schedule of #ISMB2024 so I updated it this year ismb-schedule.luispedro.org

Zhezheng will present poster A-117 “Accurate detection of tandem repeat in error-prone long reads” at #HitSeq, Sunday.

Xiaofei Carl Zang will present poster B-126 “Anchorage accurately assembles full-length anchor-flanked synthetic long reads” at #HitSeq, Saturday;

The presence of my lab at #ISMB2024 is two proceedings paper presentations and two poster presentations: @QianShi15 will present proceedings paper “Accurate assembly of multiple RNA-seq samples with Aletsch” at #iRNA, Saturday 2:20pm; 1/2