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1/ 🦟 Big news: #Pathoplexus now supports Dengue virus & Yellow Fever virus - two arboviruses responsible for over 400 million infections and up to 94,000 deaths per year. Here's what’s new in our latest update 👇🏻 Read the full update: pathoplexus.org/news/2026-03-1… 📰

5/5 If you want to try it out, check out the documentation and open-source code here: 🌐 Website: eve-lab.org/blog/SimPlot-CL 📂 GitHub: github.com/hodcroftlab/si… Feedback and feature suggestions are very welcome! 🙂

4/5 The tool is inspired by great existing software like the original SimPlot (Lole et al., 1999), but provides a command-line implementation that enables smooth integration into bioinformatics pipelines (e.g. Snakemake or Nextflow workflows).

1/5 Introducing SimPlot-CL! 🧬 Recombination plays an important role in viral evolution. Similarity plots are a great way to visualize recombination patterns, but generating them across many genomes can be cumbersome. 📂 github.com/hodcroftlab/si…

One of the reasons I've been quiet on Twitter for a few months is because I've been working on something big - something I'm really happy to share now! Pathoplexus.org A new, open-source database for pathogen sequence sharing. 👐🧬🌎 1/12