Victor San Kho Lin

We're on the look-out for a Genomics Assistant/Specialist to assist our #UMCCR Precision Oncology group and the genomics core program manager. Apps close 30 Nov. For PD and how to apply visit UniMelb jobs page: jobs.unimelb.edu.au/caw/en/job/910…

Up for our curation team! :)

4/ Final thought: How to be brutally honest about a piece of code you've written? TDD techniques, test coverage are there, yes. But. Human can be unconsciously bias. Future is here with AI/ML backed bot on PR reviews; guide you code better! Will find time 2 try GH Copilot, soon.

3/ Find myself amuse addressing CodeClimate Cognitive Complexity. Yell couple times: "yah, my app is complex; wut do ya reckon!!" ;). Anyhow. Stay optimistic & fix all technical debts there. Result is positive! Btw, local pulled CC's rules db is ~6GB image ;(

1/ yawsso v1.0.0rc1 is out! Mainly addressing code quality and technical debt measures; in regards to #CodeQL, LGTM, #CodeClimate with beefing up repo DevSecOps with #trufflehog, #ggshield scanners. ditto PR #67. Some notes from the activity in thread.

The Advanced Genomics Collaboration (TAGC)—an initiative of @Illumina and @UniMelb, supported by @InvestVictoria—is a biomedical and economic powerhouse using #genomics to create world-leading projects and businesses that will improve health for everyone. TAGCAustralia.com

#UMCCR is building a database of anyone who has been touched by cancer – patients, survivors, carers, or close family members or a friend of someone diagnosed with cancer. Interested to know how you can help our research teams? Visit mdhs.unimelb.edu.au/centre-for-can…

Another exciting development in the UoM/Illumina partnership - having an Illumina Innovation lab across the floor from us: fnarena.com/index.php/2021…

A/Prof @fiamh's Genomics Platform group is the engine room of precision oncology at #UMCCR. Since '17, they have created a reliable, scalable and fast bioinformatics platform reducing the time taken to analyse genetic sequencing data from 72 to 24 hours. go.unimelb.edu.au/2i7i.

Here's a #GSoC2021 @gsoc wrap-up for htsget-rs, a 100% @rustlang implementation of the @GA4GH protocol that makes bioinformatics formats accessible to the web: umccr.org/blog/htsget-rs/ Kudos to successful 2 students Marko and Daniel & @zaeleus @chris_zen @vskl for co-mentoring!

Our latest ⁦@AJHGNews⁩ sharing tools & knowledge improves gene & panel curation! Very proud of this #collaboration ⁦@EllieMcDonagh⁩ ⁦@PanelAppTeam⁩ ⁦@PanelAppAus⁩ ⁦@GenomicsEngland⁩ ⁦⁦@AusGenomics⁩ ⁦@GA4GH⁩ 🧬🌏 cell.com/ajhg/fulltext/…

Are you a student interested in @rustlang, #bioinformatics and #AWS? Our htsget-rs idea is now up on this year's @gsoc under @GA4GH umbrella: docs.google.com/document/d/1Ep… Ping me and @vskl for more info!

NO MORE SILENCE #HearTheVoiceOfMyanmar #SaveMyanmarDemocracy asiatimes.com/2021/02/follow…

Now: #Myanmar #Yangon protesters continue to chant their opposition against #militarycoup, voicing unhappiness at #military government. #WhatishappeninginMyanmar

Oliver Hofmann (@fiamh), head of the Genomics Platform Group is using the ICA platform to standardize elements of their analysis pipelines for purposes of collaboration and broader use within the #genomics community. bddy.me/39zxeRI

As part of a newly funded University of Melbourne Genomics Hub we are expanding our team with staff bioinformaticians, data managers and curators at all levels. Help us improve the rapid analysis of patient's cancer genomes and transcriptomes. Details at umccr.org/blog/hub-jobs/

The @illumina-@unimelb Genomics Hub will provide the systems to support state-wide rollout of affordable whole-genome sequencing for cancer and critical diseases, to transform healthcare and research. @seangrimmond @fiamh @UniMelbMDHS @InvestVictoria mdhs.unimelb.edu.au/centre-for-can…

A/Prof Oliver Hofmann (@fiamh) & team have established a reliable, scalable cloud-based #bioinformatics platform to analyse the genomic data of hundreds of #cancerpatients in parallel, drastically reducing analysis time from 72 to 12hrs >> mdhs.unimelb.edu.au/centre-for-can…