Marcel Ramos

Feeling generous to start the new year, so we loaded up a fresh wallet and decided to give it away. 🎁 $2,026 in BTC to one winner 🧡 Like this post and follow @Gemini ✅ Winner selected January 2

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Omix: A Multi-Omics Integration Pipeline biorxiv.org/content/10.110…

.@HarvardBiostats 260 Introduction to Data Science starts next week. Course notes and exercises, updated weekly, are publicly available here: datasciencelabs.github.io/2023/ GitHub repo with Quarto code is here: github.com/datasciencelab…

Benchmarking spatial and single-cell transcriptomics integration methods for transcript distribution prediction and cell type deconvolution nature.com/articles/s4159…

@vincent_laufer The function would have to make assumptions about the data e.g. WRT patient and sample identifiers. It would be best implemented in its own package, see curatedTCGAData and cBioPortalData for examples.

@M2RUseR would you be interested in building function that would correctly interpret a list of flat files in a dir into a MultiExperimentAssay object in #R? I've already drafted what we'd need.

📣 We're redesigning the #Bioconductor website and we need YOUR input! Whether you're a wet lab biologist, expert developer or other, your perspectives will shape Bioconductor's future. Takes 5-10 minutes. Closes June 23. ➡️t.maze.co/169169456 #Bioinformatics #rstats

🧬💻🔥 We are excited to launch #CuratedAtlasQueryR! millions of cells at your fingertips. A thread 🧵. The harmonized and reannotated #CELLxGENE #singlecell human #atlas can be explored and retrieved as #SingleCellExperiment. Please RT! -> stemangiola.github.io/CuratedAtlasQu…

With exploding technology and increased worker productivity, it’s time to move toward a four-day work week with no loss of pay. Workers must benefit from technology, not just corporate CEOs. washingtonpost.com/wellness/2023/…

Got a master/PhD degree & want to work spatial transcriptomics + sc/snRNA-seq, as well as create #rstats/@Bioconductor training materials? Then you might want to work with @martinowk & @LieberInstitute apply for this job ad: recruiting.paylocity.com/recruiting/job… #recruiting #DataScience

@lcolladotor Oh no! Feel better soon Leo 🤒

Doc: Are you a scientist? Me: Yes Doc: So, you have a non statistically significant fever. Me: 🥲 Doc: Stay home till the PCR result comes back. Thursday if we are lucky, Friday otherwise. Take Tylenol / Ibuprofen + cold meds as necessary.

Two of the best statistics books using biological data as examples: 1. Modern Statistics for Modern Biology lnkd.in/e9jSU6xq 2. Data Analysis for the Life Sciences Series lnkd.in/ejWp5egX I am grateful to have those open materials available online. #genomics #rstats

@bald_mammoth @AmbroseChase @gourmetspud cucurbita pepo

@AmbroseChase @gourmetspud Oh okay, I thought spaghetti squash was just squash that had been cut up into noodles lol, thanks.

Chicas, esta semana haremos gráficas.

@lcolladotor 神奈川沖浪裏

Got some new decorations from Teotihuacán 😑💀

We're #hiring! The Lieber Institute is looking for PAID summer interns! Our interns have gone onto medical school, MD/PhD programs, law school and more. Learn about neuroscience from the best! libd.org/summer-interns…

Delighted to introduce correspondence analysis of scRNAseq. We show CA of Freeman-Tukey residuals outperforms CA of the Pearson Residuals corral: Single-cell RNA-seq dimension reduction, batch integration, and visualization with correspondence analysis biorxiv.org/content/10.110…

Hi 👋🏾! I'm #hiring a Staff Scientist (PhD level or Masters + experience). Come join us @LieberInstitute at "R/@Bioconductor-powered Team #DataScience" lcolladotor.github.io/bioc_team_ds/ We have lots of data & interesting projects ^^ with @JohnsHopkins colleagues 😊 recruiting.paylocity.com/recruiting/job…

Fue un placer dar el mini curso de "Creación de paquetes de software de R/@Bioconductor" con @M2RUseR 🙌🏾 I loved ❤️ teaching about #rstats 📦 with Marcel. Last @CDSBMexico @RBioinformatica @nnb_unam mini course sponsored by @codeforsociety #rstatsES comunidadbioinfo.github.io/minicurso_juli…