Constantin Pape

Looking for a PhD position at the intersection of AI, imaging, and gene therapy? Apply for this position in my lab: tinyurl.com/2a2v6tvx Part of sfb1690.uni-goettingen.de that studies hearing, vision, and more. Plus, you can create pretty pictures like the one below :).

🚀 Today we’re releasing FlashOptim: better implementations of Adam, SGD, etc, that compute the same updates but save tons of memory. You can use it right now via `pip install flashoptim`. 🚀 arxiv.org/abs/2602.23349 A bunch of cool ideas make this possible: [1/n]

I'm looking for a Swiss department to host me for an SNSF StG. I research how gene expression evolves and emerges by combining wet lab + computational work in a variety of model systems. More: timothyfuqua.com If your department might be a match, let’s chat!

Retweeting as an AC: Please sumbit your CVPR reviews ;)

The #CVPR2026 review deadline is fast approaching: January 12, 2026. If you face any difficulties, contact your Area Chair NOW! Approach your reviews the way you would expect your own to be handled, and consult the reviewer guidelines here: cvpr.thecvf.com/Conferences/20…

OK can you guys please dedicate even half the energy you collectively use critiquing Empire of AI to also critique the massive work of harmful pseudoscience by Yud and Soares that was also a NYT Bestseller

This work was an excellent collaboration with the group of Tobias Moser, building on the cutting edge light-sheet microscopy of the Huisken lab. Special thanks to Lennart, Aleyna, Elisabeth, and Martin! If you want to use CochleaNet, check out github.com/computational-…

We comprehensively evaluate our method and use it to analyze intact mouse and gerbil cochleae, including SGN sub-types, and to validate (opto-)genetic therapies preclinically (see screenshot). CochleaNet is also applicable to lower-resolution data from commercial systems.

Preprint alert! CochleaNet, our framework for analyzing cochlear light-sheet data. It consists of three networks to segment spiral ganglion neurons, inner hair cells, and detect synapses. Rendering of a full cochlea below, find the preprint at doi.org/10.1101/2025.1…

Any arivis experts here that could help with opening an old .sis file? See forum.image.sc/t/opening-old-…

We are hiring the second cohort of EvoReSt PhD students. If you are interested in deep evolutionary questions, checkout: uni-goettingen.de/de/687607.html Apply here: obp.uni-goettingen.de/de-de/OBF/Inde…

I just published a video showing how to use Pixi and Napari-Easy-Augment-Batch-DL for reproducible deep learning segmentation. In this example, I use Pixi to set up a Python environment then launch Napari to explore and compare Cellpose3 and Micro-SAM. youtu.be/3ObAnSTBri8

@BharadwajAnupam We will evaluate all applications received beginning of next week. So if you send it in until then we will take your application into account.

@cppape Please let me know, what's the last date. Thank you

Are you looking for an exciting position at the intersection of super-resolution microscopy and AI? Then check out the PhD and PostDoc position we offer for a joint project with the Group of Stephan Hell at MPI Göttingen. Please RT, read on for links and details.

Looking for an opportunity to work on cutting super-resolution microscopy and AI? There's still time to apply to the two positions!

4th paper with my brother @AbedShaib. Second on AI. A shared path with our PhD supervisor Ute, who supervised me during my PhD & now supervises him. Proud of this new publication in @NatureComms. A big thank u to our Editor @sgqcheng & our collaborators! nature.com/articles/s4146…

Really excited to share this Perspective from John Danial covering how technology is moving the field of fluorescence microscopy toward structural biology. nature.com/articles/s4159…

The science cuts are affecting incredibly important research. I am very sorry for Uri and the academic landscape in the US in general.

Our goal is to develop methods to understand the dynamics of biomolecules, using the latest developments in super-resolution microscopy and AI-based image analysis. Apply here: uni-goettingen.de/de/699491.html uni-goettingen.de/de/699489.html