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Will you @joinmastodon? I have and am now a Patreon supporter of this federated social network #TwitterMigration patreon.com/mastodon?utm_m…
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Peter Cock
33.3K posts
Peter Cock
@pjacock
Bioinformatician at @HuttonICS, one of developers on @Biopython; @OBF_news president. Tweets are my own. He/him/his https://t.co/ODTvOjGtDb
Dundee, UK เข้าร่วม Temmuz 2009
746 กำลังติดตาม4K ผู้ติดตาม
Peter Cock รีทวีตแล้ว
Peter Cock รีทวีตแล้ว
Peter Cock รีทวีตแล้ว
Do people have favorite genome similarity matrix viz examples that they would suggest we implement in sourmash? Think "have N genomes / samples, want to cluster & display comparison of them all." Pointers to papers and tutorials v. welcome! cc @pjacock ref github.com/sourmash-bio/s…
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@ctitusbrown Similar struggles with getting the best out of @widdowquinn's PyANI github.com/widdowquinn/py… and large matrices. Currently that output is very similar to sourmash (heatmap with dendrogram), plus the option of a sample-type color key
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Peter Cock รีทวีตแล้ว
I have banged on at length about this problem, in the context of this project, before.
figshare.com/articles/poste…
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Peter Cock รีทวีตแล้ว
Great work by @pjacock @Llewelyn68 and Pete Thorpe, finally getting this one into the public eye!
My personal takeaway from working on this is that accurate metabarcoding is much harder than most people, or publications, let on.
biorxiv.org/content/10.110…
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@flashton2003 are you on Mastodon? I saw bitsandbugs.org/2023/04/03/how… via the news feed, and wanted to post/boost it over there (where I'm @pjacock" target="_blank" rel="nofollow noopener">fediscience.org/@pjacock ) since I hardly touch Twitter anymore. Thanks
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Peter Cock รีทวีตแล้ว
Peter Cock รีทวีตแล้ว
Peter Cock รีทวีตแล้ว
Universal masking linked to fewer covid cases in schools, study finds - The Washington Post washingtonpost.com/education/2022…
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Peter Cock รีทวีตแล้ว
If you want to automatically follow on 🐘 the people that you follow on 🐤, Debirdify is a good way to do it. Do it now while you still can. debirdify.pruvisto.org
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Peter Cock รีทวีตแล้ว
The @UniOslo now imposing a two-factor authentication without asking for any feedback from the scientific community. We now need to have our phone to validate the login with ssh for instance! Every freaking time... It is very annoying IMO. Also imposed on email, calendars, etc.
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Peter Cock รีทวีตแล้ว
If you are a college student who likes to nod intently at your professors while they're talking in class, just know that all of them adore you and think you are the absolute greatest
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Peter Cock รีทวีตแล้ว
I see questions like, "Can I just post stuff on preprint servers instead of submitting to journals?" on Quora pretty regularly.
Sure - if you don't care about having a full-time paid career in research.
Federico Giorgi@giorgilab
@BardinLab @wolfgangkhuber Student recently told me she doesn't need to publish anything, because Biorxiv exists. Of course grant agency wanted real publications and we didn't get the grant renewal. i don't blame biorxiv but its existence gives a great excuse for lazy students not to write polished papers
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Peter Cock รีทวีตแล้ว
Grr. I woke up yesterday with a crick in my neck and it is still bugging me. I am thankful though that I did not get a Watson.
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Peter Cock รีทวีตแล้ว
We are so sad to share the news that our key architect and lead engineer has passed away. @SimonGladman1 was as smart and generous as they come - a role model for us all. Deepest condolences to his many friends and much loved family biocommons.org.au/news/simon-gla…
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Peter Cock รีทวีตแล้ว
BOSC now has a Mastodon account at @BOSC" target="_blank" rel="nofollow noopener">genomic.social/@BOSC along side our OBF account at @OpenBio" target="_blank" rel="nofollow noopener">genomic.social/@OpenBio #TwitterMigration
#BOSC2023 will be in Lyon, France as part of ISMB/ECCB 2023 iscb.org/ismbeccb2023
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