Amanda Kedaigle

So excited to see my and @uzquiano_a's work on an expansive cortical brain organoid single cell atlas come out today in @CellCellPress! You can find the final paper here free for the next 50 days: authors.elsevier.com/c/1fqjfL7PXiq4W

Did @10xGenomics just make newer versions of Cell Ranger open source? github.com/10XGenomics/ce… (cc @sjackman, @luizirber). This is a huge win for open, transparent, and reproducible science if it’s the case!

@RKastli @3Brain @ArlottaLab Congrats Rahel!! 🥳🥳

Excited and honored to be awarded the Massimo Grattarola Award🥳! Thanks to @3Brain, the jury, and the entire @ArlottaLab for their incredible support🤩. Such a motivating recognition!

type in your name and cat after it in the gif section and post whatever pops up

scientist after sequencing lots of single cells

Every researcher's dream.

New poems by @CAConrad88, Sandra Cisneros, and myself. All on summer. Here’s mine, about the playground by my house 💙💙 culturedmag.com/article/2023/0…

Bittersweet to say my last publication from @ArlottaLab & @jzlevin 's groups is out! What a fantastic team to work with ❤️ Click through to learn about our follow up on another mutated ASD risk gene in human brain organoids.

Harvard loses no time in calling attention to the loophole saying they will comply with it.

@ChrisMartey @CV_UHB @HEIW_NHS Congrats! A place where you'll really make a difference :D

I'm delighted to have joined @CV_UHB today as the Multi-Professional Primary and Community Care Education & Training Lead I look forward to supporting the delivery of the '#PrimaryCare Model for #Wales' and broader aspirations set out within the 'A Healthier Wales' Strategy. 🏴󠁧󠁢󠁷󠁬󠁳󠁿

not often that you see courts rule in favor of women survivors, let alone 3 high profile instances in one day, making note for posterity’s sake

Incredibly proud to see our benchmark of single-cell preprocessing methods finally published 🥳🥳🎉 We show that despite its theoretical limitations, no other transformation consistently outperforms log(y/s+1). All details at nature.com/articles/s4159… and github.com/const-ae/trans…

Pick Two: - Call TWO state representatives to tell them that you support transgender rights and gender-affirming healthcare. - Make a SM post that your extended family and your peers will see that shows adamant support for trans people. - Donate money to the cause.

The lengths that bioinformaticians will go to to avoid learning C 😅 (🙋 guilty)

In 2018, "Parachute use to prevent death and major trauma when jumping from aircraft: randomized controlled trial" was published in the British Medical Journal. It sought to determine if wearing a parachute when jumping from a plane had any impact on survivability. It did not.

There are a hundred paths through the world that are easier than loving. But, who wants easier? -Mary Oliver

It's frustrating reading comp bio articles these days because many keep falling into the same pitfalls. Hard to know if the method actually works, or whether they messed up the evaluation. Here are some issues I've seen recently (w/o names):

“Feminism is supposed to be about equality” no it isn’t. It’s about liberation. I don’t want to be treated like a man. Y’all are not the blueprint. What I do want is to be free of mens’ power and influence in determining how I’m treated *as a human being*

Thrilled to share my primary PhD work: a Transcription Factor Atlas for understanding gene regulation and cell engineering @CellCellPress. We created a comprehensive TF ORF library and applied it to profile resulting expression changes. A thread 1/X sciencedirect.com/science/articl…