Aaron Newman Lab

1/ Thrilled to share our new paper, out today in @Nature: "Non-invasive profiling of the tumour microenvironment with spatial ecotypes". Paper (open access): nature.com/articles/s4158…

16/ GitHub: github.com/digitalcytomet… Web interface: spatialecotyper.stanford.edu

15/ We are grateful to our funding sources including @theNCI, @TheVFoundation, @CancerRF, @MelanomaReAlli, and @Ludwig_Cancer. We deeply thank the patients and their families whose generous contribution of samples made this research possible.

1/ Thrilled to share our new paper, out today in @Nature: "Non-invasive profiling of the tumour microenvironment with spatial ecotypes". Paper (open access): nature.com/articles/s4158…

Thanks @IamLinghua !!

SCI @AaronNewmanLab & others unveil CytoTRACE 2, a deep learning tool that predicts absolute cell developmental potential from #SingleCell RNA-seq data, outperforming prior methods and refining maps of cell fate and potency across tissues. brnw.ch/21wX6j4 @kang_minji_

CytoTRACE 2: an interpretable deep-learning method that uses scRNA-seq data to predict absolute developmental potential across datasets. nature.com/articles/s4159…

@IamLinghua @czbiohub @theNCI Thanks @IamLinghua!

@AaronNewmanLab @czbiohub @theNCI 🎉Congratulations, Aaron!

Congrats to a brilliant team for bringing CytoTRACE 2 to life and grateful to our funding sources including @czbiohub @theNCI