Allison Creason

A massive team science effort involving researchers spanning the globe: Today, UCSCGenomics @StuartLab @BrooksLab @ucscxena were among >1,300 publishing the #PanCancer Project, a huge milestone in cancer research. 👏👏🏻👏🏼👏🏽👏🏾👏🏿 🔬💻 Watch youtu.be/i_pldYFZMBo #PCAWG

Galaxy Release 19.09 is out! Workflow Invocation Reports, Interactive Tools, and new Visualizations are the highlights. Thanks to everyone who helped us debug and polish this beast of a release. Release Notes: docs.galaxyproject.org/en/master/rele… User Notes: docs.galaxyproject.org/en/release_19.…

“I never dreamed that the tumors would be reduced and that there would be nothing new.” -SMMART patient Beth Shia Our SMMART clinical trial platform is profiled in this @GreatBigStory video highlighting OHSU’s collaboration with @MicronTech. Learn more: greatbig.is/2Oh9Nkx

@madison_a_tyler Next one is at OHSU, so definitely then!

@AllisonCreason Awww I was hoping we could get dinner! Next time ;)

Only 4 days left until the HTAN F2F meeting. Getting excited to talk about our Center's progress on TNP SARDANA and the results of the QC metrics survey.

@madison_a_tyler Unfortunately not, but I will be tuning in to the breakout sessions :)

@AllisonCreason See you there!? :)

Once we understand how the cancer has become resistant we are able to identify a drug or drugs that can be combined together to regain control of the cancer." -Dr. Joe Gray bit.ly/2OWnszb

What is a human tumor atlas? Here's an overview: cancer.gov/research/key-i… (PDF) @NCIHTAN #CancerResearch

Open letter from @kellrott, @justin_guinney and co, that looks back at recent DREAM M2D challenges to explore how reproducibility can be improved, including protecting sensitive data in the cloud genomebiology.biomedcentral.com/articles/10.11…

Registration & Abstract Submission for the 2019 Galaxy Community Conference (GCC2019) are now open! galaxyproject.org/news/2019-03-g… #usegalaxy and see you in Freiburg!

I'll be speaking at @bioitworld on our visualization work and needs in precision oncology at @OHSUKnight

For science!! @oregon_healthy

Great story about our precision oncology work at @OHSUKnight : onwardohsu.org/blog/detail/pr…

Researchers at @OHSUKnight have built a new kind of #clinicaltrials platform to find combinations of drugs to use to stop tumors before they can adapt and become drug-resistant: bit.ly/2DrG0BW #OHSUresearch

Very excited to lead implementation of the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-Space (AnVIL) along with Anthony Philippakis @broadinstitute... genomeweb.com/informatics/br…

My team's first day at the new @OHSUKnight Cancer Research Building

After a decade of work, the genome for bread wheat has finally come into focus: scim.ag/2MtJbho

We all have that one weird cousin. #vibrio #evolution #SciArt

Conda for data? Yes please. anaconda.com/blog/developer…

New alpha release of Monocle 3 out today (v2.99.1), with lots of new features for clustering and finding markers for cell types. See a tutorial for how to use the new stuff here: #tutorial-2-mca-dataset-analysis-clustering" target="_blank" rel="nofollow noopener">cole-trapnell-lab.github.io/monocle-releas…

🐳 combines the best of a bunch o' tools ⇩ "liftr: an R Package for Persistent Reproducible Research" 🗣 @road2stat buff.ly/2M0l0ne #rstats #JSM2018