Amanda Perofsky

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Amanda Perofsky

Amanda Perofsky

@aperofsky

Research scientist @BrotmanBaty @Fogarty_NIH | Infectious disease ecologist

Seattle, WA Katılım Ağustos 2009
244 Takip Edilen271 Takipçiler
Amanda Perofsky
Amanda Perofsky@aperofsky·
Thank you to @Complexity72h for bringing together such a great group of students and tutors in Madrid. The RSV team:
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Olena Hołubowska
Olena Hołubowska@OlenaHol·
Seasons disrupt, mobility shapes waves, RSV's dance shifts. This haiku summarizes our #complexity72h project on RSV's patterns and mobility impacts. Fantastic team, incredible 72 hours! Results coming soon!
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Complexity 72h
Complexity 72h@Complexity72h·
That’s all folks! …until next time!
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Complexity 72h
Complexity 72h@Complexity72h·
Our tutors are ready
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Complexity 72h
Complexity 72h@Complexity72h·
Our tutors be like Friday afternoon: talk at @NetSciConf in Québec Monday morning: ready for Complexity72h in Madrid
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Fogarty at NIH
Fogarty at NIH@Fogarty_NIH·
🎉Congrats to Fogarty's Amanda Perofsky, Chelsea Hansen, and Cécile Viboud& their co-authors! Their paper on impacts of human mobility on transmission of respiratory viruses has been added to @NatureComms Editors’ Highlights on Public Health: nature.com/collections/jc…
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Cécile Tran Kiem
Cécile Tran Kiem@CecileTK_·
The location of pairs of identical sequences is in line with expectations from cell phone derived mobility data. Outliers in the relationship between genetic and mobility data can be explained by large clusters of identical sequences shared between male prisons' postal codes. 4/
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Amanda Perofsky
Amanda Perofsky@aperofsky·
Very cool work by @CecileTK_ that uses pairs of identical sequences to study fine scale transmission patterns of SARS-CoV-2 in WA state. This method can take full advantage of large pathogen genome datasets without needing to construct computationally intensive phylogenetic trees
Cécile Tran Kiem@CecileTK_

Pathogen genomes can provide insights into underlying disease transmssion patterns but new methods are needed to analyze large genome datasets. In our new preprint, we use identical pathogen sequences to characterize fine scale SARS-CoV-2 transmission: tinyurl.com/4dfhwf8h

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Amanda Perofsky
Amanda Perofsky@aperofsky·
Excited to share that our study "Impacts of human mobility on the citywide transmission dynamics of 18 respiratory viruses in pre- and post-COVID-19 pandemic years" is out now @NatureComms doi.org/10.1038/s41467…
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Fogarty at NIH
Fogarty at NIH@Fogarty_NIH·
Mobile device location data helped predict SARS-CoV-2 transmission. Is it a useful predictor for other respiratory viruses? Read just-published study from Fogarty’s Amanda Perofsky, Chelsea Hansen & Cécile Viboud and co-authors. @uwmedicine @gatesfoundation @HHMINEWS
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Amanda Perofsky
Amanda Perofsky@aperofsky·
We related trends in cellphone mobility, masking, and COVID-19 NPIs to the dynamics of SARS-CoV-2 and 17 endemic viruses, incl. flu viruses, RSV, seasonal CoVs, and rhinovirus, over the course of 4 years (2018 - 2022), using surveillance data from the Seattle Flu Study.
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