Austin Wang

10 posts

Austin Wang

@austintwang

AI for Bio at @EvoscaleAI / @officialbiohub https://t.co/M2jsZ16DVl

Katılım Ocak 2015

311 Takip Edilen108 Takipçiler

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Aman Patel@amanpatel100·12 Şub

Excited to announce our latest work! We present ARSENAL, a short-context DNA language model specifically designed to learn important sequence features in noncoding regulatory DNA. Why is such a model important? Read on to find out! biorxiv.org/content/10.648…

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Anshul Kundaje@anshulkundaje·4 Ara

@amanpatel100 is a fantastic CS grad student graduating ~March 2026, interested in AIxBio industry positions. Has deep expertise in DNA/bio language models, sequence-to-function models, popgen/evolution. Please touch base with him (link in next message) if u have positions 1/

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Yun S. Song@yun_s_song·22 Eyl

We are excited to share GPN-Star, a cost-effective, biologically grounded genomic language modeling framework that achieves state-of-the-art performance across a wide range of variant effect prediction tasks relevant to human genetics. biorxiv.org/content/10.110… (1/n)

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Anshul Kundaje@anshulkundaje·29 Tem

Thanks to @riyavsinha in my lab, @igvteam browser will natively support dynseq (dynamic sequence tracks) in an upcoming release. These tracks are very useful to directly visualize base-resolution scores (e.g. contribution scores from ML models, conservation etc). 1/

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Peter Koo@pkoo562·15 Tem

Our work on "Evaluating the representational power of pre-trained DNA language models for regulatory genomics" led by @AmberZqt with help from @NiraliSomia & @stevenyuyy is finally published in Genome Biology! Check it out! genomebiology.biomedcentral.com/articles/10.11…

Peter Koo@pkoo562

Do current genomic language models (pre-trained on whole genomes) learn a foundational understanding of biology in the non-coding region of human genomes? A new evaluation led by @AmberZqt suggests not yet! 1/N paper: biorxiv.org/content/10.110…

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Anshul Kundaje@anshulkundaje·25 Haz

This a really exciting leap forward for genomic sequence to activity gene regulation models. It is a genuine improvement over pretty much all SOTA models spanning a wide range of regulatory, transcriptional and post-transcriptional processes. 1/

Pushmeet Kohli@pushmeet

Happy to introduce AlphaGenome, @GoogleDeepMind's new AI model for genomics. AlphaGenome offers a comprehensive view of the human non-coding genome by predicting the impact of DNA variations. It will deepen our understanding of disease biology and open new avenues of research.

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Anshul Kundaje@anshulkundaje·15 May

Today was a big day for the lab. We had two back to back thesis defenses and the defenders defended with great science and character. Congrats to DR. @kellycochra & DR. @soumyakundu_ on this momentous achievement. Brilliant scientists with brilliant futures ahead. 🎉🎉🎉

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Betty Liu@bettieliu·3 May

Delighted to share our latest work deciphering the landscape of chromatin accessibility and modeling the DNA sequence syntax rules underlying gene regulation during human development! biorxiv.org/content/10.110…. Read on for more 🧵 [1/16]

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