Clarity Protocol@clarity_proto
Major update to Clarity Protocol
We just shipped a full computational peptide discovery pipeline. Here's what that means:
1/ Clarity now has 6 autonomous AI agents running 24/7. The newest one mines bioactivity databases for known protein binders, designs novel candidate peptides targeting aggregation-prone regions, and scores them through multi-property drug-likeness filters.
2/ Every candidate peptide gets structural binding prediction; a computational measure of how strongly it binds the target protein. First batch scored in the "strong binding" range. These are computational predictions, not experimental results, but they tell us which candidates are worth testing in a real lab.
3/ The complex prediction daemon now processes protein-protein interaction jobs end-to-end. Queue a complex → structure prediction runs → results pushed to production. Currently predicting interaction structures relevant to Alzheimer's.
4/ 50+ folds across 13 proteins. Hundreds of candidate peptides designed and scored. Each one goes through bioactivity validation, structural analysis, and multi-gate screening. All visible on clarityprotocol.io. Some may still be processing.
The next milestone is experimental validation; synthesizing top candidates and running real binding assays. The computational pipeline prioritizes what's worth testing.
*A note on IP: All candidate peptide sequences on clarityprotocol.io are now redacted behind coded identifiers (CP-TAU-001, CP-SOD1-002, etc.). We show binding strength tiers, drug-likeness assessments, and target regions, but not the actual sequences. Raw data is stored locally and protected. If you're a researcher or wetlab interested in collaboration, reach out directly. We take IP seriously while keeping the platform open.
*Filing for provisional patent
*Architecture graph generalized to protect our methods