Daub Lab

🌐We've implemented this annotation strategy on a user-hosted web platform, enabling easy data import, query, and export, making it perfect for both internal documentation and large-scale collaborations 🔗 doi.org/10.1093/gigasc…

🔑 With controlled vocabularies and required fields, we've enhanced the consistency and ease of annotating sequencing experiments, making data more comparable and accessible. #research #genomics #sequencing Explore more: 🔗 doi.org/10.1093/gigasc…

🧬 Our annotation structure covers everything from biological sample prep to library creation, sequencing, and processed files, ensuring data quality, comparability, and ease of use across experiments. #bioinformatics #dataquality Explore more: 🔗 doi.org/10.1093/gigasc…

📊 We developed a structure to capture all experimental details for better data sharing. #sequencing #dataannotation doi.org/10.1093/gigasc…

🧬 We explored the regulatory landscape from zygote to organogenesis, revealing the unique topology & chromatin features of active regulatory elements. Fascinating connections for developmental studies! #epigenetics #genomics Explore more: 🔗 danio-code.zfin.org #devbio

🌱 With 140,000+ cis-regulatory elements mapped across zebrafish development, we’ve identified distinct regulatory classes based on their activity in time and space. Major insights for developmental biology! #zebrafish #genome Explore more: 🔗 danio-code.zfin.org #genomics

🔬 We’ve curated a comprehensive dataset of 1,802 genomic data sets, combining unpublished & re-analyzed data to refine zebrafish annotations, aiding experimental design and advancing developmental genomics. #research #bioinformatics Explore more: 🔗 danio-code.zfin.org

🚀 The international DANIO-CODE consortium has the systematic functional annotation program for #zebrafish, a key model in embryonic development and disease research! Explore more: 🔗 danio-code.zfin.org#genomics #devbio

We at Daub lab are grateful for all the small and big contributions this year and hope that 2025 will be as exciting as this year. Happy New year from us.🥳

A game-changer for studies on disease, evolution & gene regulation! 🐾🧬 #Genomics #DoGA

🧪Asthma-linked SNPs such as those near the SBNO2 and SLC19A1 genes coincide with enhancer regions, shedding light on gene regulation mechanisms in childhood asthma. #SNPs #EnhancerOverlap #AsthmaGenetics sciencedirect.com/science/articl…

🧬A signature of 91 enhancers distinguished between children with severe and mild asthma as well as controls. Discover more here:#duablab #AsthmaResearch #Genetics doi.org/10.1016/j.heli…

8,289 identified enhancers linked to mild and severe asthma in children. Read below how this can impact future treatments. #duablab #AsthmaResearch #Genetics sciencedirect.com/science/articl…

Publication Alert! We´re excited to announce that our research on the gene regulatory enhancers in severe and mild asthma in children in Heliyon. Uncover how these findings could lead to new therapeutic strategies. Read the full article here: sciencedirect.com/science/articl…

Challenging bioinformatics postdoc position @karolinskainst working with gene regulation in the brain: behaviour and psychiatric conditions in dogs, wolves and humans. With collaborator @HannesLohi ki.varbi.com/en/what:job/jo… #postdocposition #Bioinformatics

The comprehensive atlas of developmental regulatory elements in zebrafish is published today in @NatureGenet nature.com/articles/s4158…. In addition to the BioRxiv submission twitter.com/daniocode/stat… in this paper we added further resources and results. (1/n)

Your #postdoc mission with @DogGenome, should you accept it, is to find how regulatory elements determine behavioural differences between different dog breads and wolfs, and how these are related to human psychiatric conditions. nature.com/naturecareers/…

Here the link to the open call ki.varbi.com/se/what:job/jo…

Help us as #postdoc at @karolinskainst and @DogGenome to find out how brain region-specific gene regulatory elements determine behavioural differences between dog breads and wolfs, and how they might be related to human psychiatric conditions. #Jobs #postdocjobs #Bioinformatics