FAIRtracks

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FAIRtracks

FAIRtracks

@fairtracks

Mobilising the wealth of genome sequence-mapped data through consolidated #FAIR metadata and connected services. Towards an RDA working group as #RDATIGER pilot

Katılım Şubat 2021
158 Takip Edilen54 Takipçiler
FAIRtracks retweetledi
UCSC Genome Browser
UCSC Genome Browser@GenomeBrowser·
We are excited to announce the new JASPAR 2024 tracks for hg19, hg38, mm10, and mm39 which represent genome-wide predicted binding sites for transcription factors with binding profiles in the JASPAR CORE collection (@jaspar_db). Learn more at bit.ly/JASPAR2024
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UCSC Genome Browser
UCSC Genome Browser@GenomeBrowser·
We are proud to announce a new hg38 track group consisting of @HumanPangenome data. In this first release, there are tracks displaying features and variations of HPRC results compared to hg38, as well as alignment tracks. See the full announcement: bit.ly/HPRCdataInUCSC…
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FAIRtracks
FAIRtracks@fairtracks·
Eivind also took the initiative for the FAIRtracks project (+The Genomic HyperBrowser statistical analysis framework, back in 2005 or so)! Congratulations!🎂🥳 Btw: please register to the #2 kickoff for our new #rda working group, Sept 25, UTC 2-3:30pm: tinyurl.com/rda-fair-tracks
ELIXIR Norway@elixirnorway

🎉 Happy 70th Birthday to Eivind Hovig! 🎂🥳 Your outstanding contributions to #bioinformatics have paved the way for groundbreaking research in Norway and beyond. 🧬🇳🇴 Your dedication and expertise are invaluable to us, @UniOslo, @UiO_LifeSci & @Oslounivsykehus. 🏆🔬

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AQUA-FAANG
AQUA-FAANG@AQUA_FAANG·
🧬👩‍🔬Registration for the @EuroFaang Ontology Improvement Workshops is open: cutt.ly/5wfjVqIx 🔬 @emblebi will be hosting 2 virtual workshops🖥️ on utilising the new Ontology Improvement Tool within the FAANG Data Portal. 👀More information: cutt.ly/KwfjVc57
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FAIRtracks
FAIRtracks@fairtracks·
In particular, check out the birds-of-a-feather session “FAIRification of Genomic Tracks” of the #RDAplenary: rd-alliance.org/fairification-… More info will come soon!
Research Data Alliance (RDA)@resdatall

New to the RDA? Still not sure about attending the #RDAPlenary 21 in #Salzburg? Register for one of webinars to learn more about the RDA community, how to get involved, and make the most of the P21. 🌏 World friendly webinar times bit.ly/3QurkYh

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Research Data Alliance (RDA)
Research Data Alliance (RDA)@resdatall·
Next week! De-mystifying the Research Data Alliance: Learn what it is, how it works and how to get involved. 🗓️22 August 2023 🕙10:00 - 11:00 UTC Introducing newcomers to RDA and the particular benefits for the Irish community. More info and register: tinyurl.com/3jra5an9
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Galaxy Project
Galaxy Project@galaxyproject·
We are excited to share a new paper in preprint that shares the latest #genome assembly pipeline used by the Vertebrate Genome Project in Galaxy! This new pipeline is freely #accessible through Galaxy and can be run in just a few clicks! Read here: tinyurl.com/2p97ejr3
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FAIRtracks@fairtracks·
We’re at the International Congress of Genetics and Genomics in Melbourne! If you are interested in helping us bring about uniform search for genome annotations, or tracks, please come over for a chat. I will be presenting poster #224 tomorrow 12-14. #ICG2023
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International Congress of Genetics 2023@Genetics2023

Billions of dollars go into research projects that generate large amounts of publicly available genomic data, says Sveinung Gunderson @UniOslo_MED - now @fairtracks wants to bring it all together. #icg2023 @Genetics2023 @fairtracks fairtracks.net

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Australian BioCommons
Australian BioCommons@AusBiocommons·
Come to booth 27 at #ICG2023 to hear about the resources we have available such as @GalaxyAustralia, @ARGA_Genomes, Apollo and Fgenesh++ services, and our #bioinformatics training program - including recordings of all our webinars on youtube! biocommons.org.au/services
Anna MacDonald@Dr_AnnaM

Jeff Christensen, Deputy Director of @AusBiocommons, telling the @GeneticsAus AGM about national bioinformatics infrastructure support genomics: lots of resources available to (and subsided for!) Australian researchers. Check out Aus BioCommons website or booth for more info.

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Andy Yates
Andy Yates@enscore·
This has been a long road since our PR was opened 4th March 2020. I am immensely proud of the work that's gone into refget from its origins in the CRAM Reference Registry to now as a foundational standard in genomics. Thank you to all who have contributed
GA4GH@GA4GH

It's official: #refget v2.0 is the next GA4GH standard. bit.ly/3XTm4z1 This API for reliably finding the right reference sequence powers all #CRAM files. v2.0 users include GA4GH VRS, @ENASequence, and soon @ensembl. Thanks to @emblebi's @tcezard & @enscore and the team!

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UCSC Genome Browser
UCSC Genome Browser@GenomeBrowser·
We are happy to announce the release of the Highly Reproducible genomic regions for sequencing for the human (GRCh38/hg38) genome assembly, which is part of the Problematic Regions supertrack. Learn more about this release from the following news post: #062123" target="_blank" rel="nofollow noopener">genome.ucsc.edu/goldenPath/new…
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Keşfet

@jaspar_db @HumanPangenome @resdatall @EuroFaang @emblebi @jgperezsilva @Revive_Restore @MNDlab