Joe Wandy

#ProudPI in #CompMetabolomics - and many congrats to Niek, Florian, and all involved 🙌 😎

MZmine has been my #massspec processing tool for years, but as great as it is, it ate. up. my. memory; I'd run it overnight and sleep w/ fingers crossed. NO MORE w/ the new MZmine 4.0! A brief test w/ ~50 LCMS samples, it ran so smooth! So fast! Thank you @mzmine_project!

Our Prague #compMS Workshop hosted 100 researchers +online. It was a great success thanks to all presenters, participants, sponsors, and venue @IOCBPrague. @mzmine_project #SIRIUS_MS #matchms @wikidata @TheLOTUSInitia1 @GNPS_UCSD #massspec #metabolomics 1/n ...

Tens of thousands of papers/books on #masspec and/or metabolomics. How about “Metabolomics and Mass Spectrometry" together. Coming April 2024, freely available as a pdf @scrippsresearch, with a hard copy option on Amazon (~$10 printing cost). More info in the coming week.

How biologists think, #multiomics integration works…..

Great to see this paper out in @PLOSCompBiol Hoping it enables more people to integrate #multiomics data using biological #pathways, especially with #metabolomics! Fantastic to work with Fabien Jourdan aka @MetExplore, Juliette Cooke, @clement_frainay and team in Toulouse 👍👍

@BiswapriyaMisra Would you like to be a guest editor for the super special issue sir 😂

Process for writing an article for MDPI journals.

@polyomics I saw my old desk there!!

Saying goodbye to the office space.... Never seen it so tidy!

Following our earlier message, the job system was successfully restored! Please note that all jobs submitted since September 25 have failed, so you can remove them from your pending items and resubmit them (once!) - thanks for your patience! #substructure search #CompMetabolomics

@sdrogers On principle, I refuse to read any article that has the word 'AI' in it

Actual bad stuff is happening in the world. Actual stuff. And leaders are faffing around indulging the fantasies of a bunch of tech bros. theguardian.com/technology/202…

Just got my new hire goodie bag at @Metabolon !

New publication with @OxfordJournals "TopNEXt: Automatic DDA Exclusion Framework for Multi-Sample Mass Spectrometry Experiments" with @Vinny_Davies89, @joe__wandy, @ronancdaly, @sdrogers, Stefan Weidt and @BioAIgroup!

To finish up the last of the talks at this fantastic conference is @joe__wandy, discussing basket trials in precision medicine! #cbc23

Ready to hear from @joe__wandy at the Comp Bio Conference! #cbc2023 #precisionmedicine

Happy to have contributed a talk to @glasgowcompbio 2023 on 'Omics Design For Basket Trial in Precision Medicine'. Joint work with @ronancdaly from @polyomics, Kevin Bryson and Marina Flores. Slides available from github.com/joewandy/joewa….

Big news from the @glasgowcompbio conference, @joe__wandy has confirmed that "linear regession is AI" 😂

It's great to see our article about the multimodal omics analysis framework muon out! Many thanks to everyone who provided feedback along the way. 🙌 See a few highlights in the thread below.

Work done at @polyomics in collaboration with @Vinny_Davies89 @ronancdaly @jjjvanderhooft @sdrogers and others.

Our key take-away from the paper are: - Spectral deconvolution of DIA results has potential for improvement - ViMMS simulation framework allows testing of deconvolution methods in silico - ViMMS enables easy porting of novel DDA and DIA methods from simulator to real instrument

Excited to share my first paper of the year, with more to come in the pipeline! Our work comparing data acquisition methods in untargeted metabolomics has been published by @FrontiersIn Molecular Biosciencess frontiersin.org/articles/10.33….