EngeLab

Excited to have published our work on #SEQURNA, a next-generation RNase inhibitor transforming #scRNAseq & other applications. ➡️Introducing synthetic thermostable RNase inhibitors to single-cell RNA-seq 🚀 🌕 nature.com/articles/s4146… 🧵…

Happy to see our work with Jimmie Ye's lab on coordinated variation of different cell types in healthy and diseased individuals published! At the core of it is the scITD tool for tensor decomposition, rotation and interpretation strategy. Great effort by @J_E_Mitchel et al.!

Great to be part of this collaboration with @baryawno and @KharchenkoLab among others! Joint single-cell WGS/mRNA seq is an important tool to understand evolutionary processes in tumors!

My research group at Karolinska Institute in beautiful Stockholm, Sweden are hiring. We combine basic science and clinically relevant work using novel single-cell methodologies. Both experimentalists and comp. sci welcome! ki.varbi.com/en/what:job/jo… ki.varbi.com/en/what:job/jo…

We are hiring postdoctoral scholars for a very interesting project that involves both basic research on cancer evolution, and a chance to develop methods that will help shape the future of precision medicine! Apply here: ki.varbi.com/en/what:job/jo… ki.varbi.com/se/what:job/jo…

@AnnaVaharautio @NatureComms Congratulations!

Press release of our recent @NatureComms published study: Sister cells uncover pre-existing resistant states in cancer helsinki.fi/en/news/cancer…

@TheCiraLab @IwijnDeVlaminck Very cool! Congratulations!

Wrists sore from pipetting? Check out our preprint on “Surface Patterned Omniphobic Tiles (SPOTs): a versatile platform for scalable liquid handling”. biorxiv.org/content/10.110…

@Jeff_Mold @PaoloGallipoli @SepidehSheybani @AlexanderDent6 Yeah those are all very cool! Notably using sc as just another (important) tool rather than “sequence 2M cells and see what sticks”. The challenge is to move away from a highly controlled model system and still derive knowledge from the experiment.

@Jeff_Mold @PaoloGallipoli @SepidehSheybani @AlexanderDent6 Wait, which papers did this? Do you mean PDX/genetic lineage tracing-type approaches?

@ozgungokce @NatureComms @AndrovicPeter @MaSchifferer Congratulation! Looks useful.

I'm thrilled to share our study @NatureComms! Combining #MERFISH, Electron Microscopy #EM, and #scRNA-seq, we explored intricate brain injury responses and resolved #Microglia. Massive shout-out to @AndrovicPeter and @MaSchifferer. Stay tuned for more! rdcu.be/dgAIU

@FelixHorns @sydshaffer Congratulations Felix. Very cool work!

Want to sequence RNA from cells without killing them or deliver RNA programs from cell to cell? Today in Cell, we present RNA exporters, which package and secrete cellular RNA, for non-destructively monitoring cell dynamics by sequencing and delivering RNA authors.elsevier.com/sd/article/S00…

Introducing a $200 genome on the AVITI™ Sequencing System, available today. We’re driving down costs and redefining what a benchtop sequencer can do. Element empowers labs everywhere to produce their own high-quality data. Read our press release: prnewswire.com/news-releases/… #jpm2023

At #Fog2023 we’ll be hosting a panel discussion on single-cell analysis with @ADBeggs (@UniBirmingham), Martin Enge (@KarolinskaInst) and Irene Papatheodorou (@EMBLEBI). Find out more on our website: hubs.la/Q01vYVnl0 #genomics

We are delighted to announce that Martin Enge, Assistant Professor at @KarolinskaInst, will be speaking this January at the Festival of Genomics and Biodata! Find out more on our website: hubs.la/Q01shMzC0 #fog2023

@agrossfield @arjunrajlab You can do it in inkscape every time, but workload might be higher

Is there any software that combines crappiness with indispensability like Adobe?

@LarsMHolmgren Thank you for the invitation, and for a great conference day!

@KharchenkoLab Congrats, looks very useful!

Manuscript for Numbat - an RNA CNV detection tool empowered by population genetics - is out!

Last chance to register to our Single Cell Transcriptomics Symposium, only 5 seats left! Register at: elomake.helsinki.fi/lomakkeet/1193…

Welcome to the Single Cell Transcriptomics Symposium in Helsinki, Wed Oct-5th! Exciting talks from @lab_enge, Laura Elo @UniTurku, Naveed Ishaque @HiDiHlabs, @thrane_kim, @americkso, @Sahu_B, @akirataked, @lettipitko & Caroline Heckman @FIMM_UH Register @ elomake.helsinki.fi/lomakkeet/1193…