MultiQC

In case you missed it, @MultiQC was published back in 2016 - well before this twitter account was created! 📖 Here's the link in case you came here looking for it: doi.org/10.1093/bioinf…

What a great start to Festival of Genomics here in London!🧬🇬🇧 Visit us at booth #67B throughout the week to discuss optimizing pipelines, scaling workloads, and all things @nextflowio with our team.🎤 Don't miss our talk on the Biodata stage, starting shortly!

🎓 Nextflow Training Week is back on February 9-13, 2026! 📅 This free, beginner-friendly program is designed for anyone new to @nextflowio Join us for a flexible, self-paced training featuring on-demand walkthrough videos, office hours, and support from our global community.🌍 hubs.la/Q03-Jrwd0

Install or upgrade now: pip install multiqc --upgrade Full changelog: github.com/MultiQC/MultiQ… Thanks to all contributors! 🙏

Bug fixes 🐛 • FastQC heatmap Plotly export fixed • Sample filter buttons working in new template • Homer unique/total count swap corrected • Samtools coverage no longer crashes on malformed files • Bar graph reference lines work with horizontal orientation

MultiQC v1.33 is out! 🎉 4 new modules, 60% faster parquet merging, and lots of improvements. Here's what's new... 🧵

Stay in the loop with everything @nextflowio, @SeqeraLabs, @multiqc, and more!✉️ Subscribe to our newsletter to get monthly updates on new product features, industry and community insights, events, and training workshops.📚 Subscribe now: hubs.la/Q03Xf1F00

Importance of being open!🌍 One of the greatest strengths of @MultiQC is open source development.What started as a one-person project in 2015 has grown into a collaborative effort involving 235 contributors today. This represents the true spirit of open science - researchers worldwide contributing to build something greater than any individual could create alone. Such collaboration has been crucial to MultiQC's success, enabling support for an ever-expanding ecosystem of #bioinformatics tools.📊 Thank you to everyone who contributed.👏 📚 Read the blog post: hubs.la/Q03WR4RX0

#NextflowSummit now available on-demand! Be sure to check out the "MultiQC turns 10" talk by @tallphil👀

💡A simple idea emerged from the frustration of manually parsing countless bioinformatics tool outputs.📊 That idea became MultiQC, and today we're celebrating 10 years of transforming global bioinformatics🌎 📗Read the highlights blog by @SeqeraLabs: hubs.la/Q03TXC_N0

🎉 Celebrating 10 years of @MultiQC and the importance of being open! A decade ago, a simple idea emerged from the frustration of manually parsing through countless bioinformatics tool outputs: what if we could automatically aggregate and visualize QC metrics from multiple tools and multiple samples in a single, interactive report? That idea became MultiQC, and today we’re celebrating a decade of transforming bioinformatics worldwide.💡 📊 The numbers speak volumes: 🔹 Support for almost 170 bioinformatics tools 🔹 1 run every 3 seconds (25k+ daily runs) 🔹 From single contributor to 235 contributors 🔹 Over 7000 journal citations (~8-9 per day) MultiQC’s success story is fundamentally a community success story, enabled by the incredible bioinformaticians that embraced, contributed to, and championed the tool. 📚 Discover a timeline of MultiQC innovation: hubs.la/Q03Q2Jz80

Join the online #NextflowSummit event at the end of October (it's free!) to hear the latest news about @MultiQC ❤️ Register here: summit.nextflow.io 🎟️

🎉 Celebrating 10 Years of @MultiQC What began as a simple QC reporting tool has evolved into an essential resource used by thousands worldwide, becoming integral to #bioinformatics. This success reflects the strength of collaborative development and the incredible open science community. 🌍 We're extremely grateful for those who have provided invaluable feedback to help shape MultiQC's development over the years. 🔍 hubs.la/Q03Bg-g90

Modules #QUAST and #Trimmomatic got minor updates, and #VEP and #BclConvert got bugfixes. There were also a number of tweaks and fixes for AI summaries ✨ See the full changelog here: github.com/MultiQC/MultiQ…

Ever wanted to set report Toolbox settings from the CLI whilst generating reports? (highlight, hide, and rename samples) Now you can! We finally closed this ancient issue from 2016 🧓🏻🌈🎉 github.com/MultiQC/MultiQ… See the docs to get started: #toolbox-settings" target="_blank" rel="nofollow noopener">docs.seqera.io/multiqc/gettin…

Did you see, @MultiQC v1.28 went out a few days ago! There are a handful of release highlights for this version, but perhaps the most exciting is that .gif, .webp and .tiff files are now supported for #CustomContent - you can finally put your favourite gifs into reports!

@tallphil on: .Nextflow .nf-core pipelines .MultiQC check it out👇 youtu.be/Ke2UMiZvS7E?si…