nf-core

The @nf_core paper is out in @NatureBiotech ! 🍾 nature.com/articles/s4158… 📖🤓 Read about how the @nf_core framework provides community-curated @nextflowio bioinformatics pipelines, ready for use across any institute or research facility ✨🧬🧫🖥️ (1/5)

Pipeline release! nf-core/rnafusion v3.0.1b - 3.0.1b! Please see the changelog: github.com/nf-core/rnafus…

Pipeline release! nf-core/rnafusion v3.0.1b - 3.0.1b! Please see the changelog: github.com/nf-core/rnafus…

Pipeline release! nf-core/pixelator v2.2.0 - nf-core/pixelator 2.2.0! Please see the changelog: github.com/nf-core/pixela…

Pipeline release! nf-core/pixelator v2.1.0 - nf-core/pixelator 2.1.0! Please see the changelog: github.com/nf-core/pixela…

Pipeline release! nf-core/pixelator v2.0.0 - nf-core/pixelator 2.0.0! Please see the changelog: github.com/nf-core/pixela…

Pipeline release! nf-core/oncoanalyser v2.0.0 - 2.0.0 - Flame Robin! Please see the changelog: github.com/nf-core/oncoan…

Pipeline release! nf-core/scnanoseq v1.1.0 - nf-core/scnanoseq v1.1.0 - Iron Alligator! Please see the changelog: github.com/nf-core/scnano…

Bring along anything you are working on and meet others in the Asia Pacific Nextflow and nf-core community. For more information and links, see the nf-core blog post: nf-co.re/blog/2025/apac…

Who: - Anyone When: - Wednesdays, 3.00 PM NZDT - Wednesdays, 1.00 PM AEDT - Wednesdays, 12.30 PM ACDT - Wednesdays, 12.00 PM AEST - Wednesdays, 11.30 AM ACST - Wednesdays, 11.00 AM AWST Where: - Gather Town

nf-core weekly help desk is coming to Asia Pacific! After the success of the European and American time zones, help desk is coming to Asia Pacific starting Wednesday, March 12. Join this week's hosts, @awgymer and @Chris_Hakk, and discuss all things Nextflow & nf-core.

Pipeline release! nf-core/demultiplex v1.6.0 - 1.6.0! Please see the changelog: github.com/nf-core/demult…

Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå! Please see the changelog: github.com/nf-core/sarek/…

I thought I'd post it first, but Sara beat me to it... We have published SAMURAI, a reproducible pipeline to analyze data from shallow whole-genome sequencing experiments, leveraging the great @nf_core framework and @nextflowio. academic.oup.com/bib/article/26…

Pipeline release! nf-core/nanostring v1.3.1 - v1.3.1 - 2025-01-20 - Micrometre patch! Please see the changelog: github.com/nf-core/nanost…

@mvanins @coregenomics @NatRevMCB We have a components cheat sheet and a few other bits that might help :) nf-co.re/docs/guideline…

@coregenomics @NatRevMCB I agree! I think they're also very good for summarizing sequencing data processing pipelines (like @nf_core uses). I wish they were easier to draw though!

Now Online: Sequencing technologies to measure translation in single cells bit.ly/3PEoqOW

Pipeline release! nf-core/pixelator v1.4.0 - nf-core/pixelator v1.4.0! Please see the changelog: github.com/nf-core/pixela…

This is an exciting one - the first @nf_core pipeline for remotely sensed satellite imagery 🛰️ alongside auxiliary data. It produces a set of trend files related to land-cover changes 🌍 Congrats to Felix Kummer and team on this milestone! 🎉

Pipeline release! nf-core/rangeland v1.0.0 - nf-core/rangeland 1.0.0! Please see the changelog: github.com/nf-core/rangel…

Interested in #nfcore #nextflow #pipelines? 🐛 Need help setting up/debugging a pipeline/run? 🦆 Developing a pipeline and need brainstorming? 🗣️ Join the @nf_core weekly helpdesk w/ experts! 1st EMEA-APAC session of 2025 today @ 10:00 (CET) on #gather-town" target="_blank" rel="nofollow noopener">nf-co.re/join#gather-to…

Pipeline release! nf-core/taxprofiler v1.2.2 - v1.2.2 - Bouncy Basenji Patch! Please see the changelog: github.com/nf-core/taxpro…