nf-core

The @nf_core paper is out in @NatureBiotech ! 🍾 nature.com/articles/s4158… 📖🤓 Read about how the @nf_core framework provides community-curated @nextflowio bioinformatics pipelines, ready for use across any institute or research facility ✨🧬🧫🖥️ (1/5)

What a collaborative few days of #Nextflow Training and @nf_core Hackathon here in Boston!🌏Congrats to our rubber duck winners.🦆Huge thanks to everyone for making such a great event!

Day 2 of @nextflowio training and the @nf_core community hackathon is underway! After a fantastic first day of learning and collaborating, we're back and ready to build. #NextflowSummit

A fantastic end to day 1 of the @nf_core hackathon! Great to see progress across projects including cellpainting, sarek parabricks integration, dragen pipeline initiation, and crispr!🤩Looking forward to more updates and progress tomorrow! 👏

The @nf_core Hackathon has officially kicked off here in Boston! 🎉 Whether you're an experienced Nextflow developer or just getting started, this is where great pipelines and even better connections are made. Time to build something amazing together! #NextflowSummit

Less than 1 hour to go until the community @nf_core hackathon begins here in Boston!🍏The team are ready to go.

Pipeline release! nf-core/rnafusion v3.0.1b - 3.0.1b! Please see the changelog: github.com/nf-core/rnafus…

Pipeline release! nf-core/rnafusion v3.0.1b - 3.0.1b! Please see the changelog: github.com/nf-core/rnafus…

Pipeline release! nf-core/pixelator v2.2.0 - nf-core/pixelator 2.2.0! Please see the changelog: github.com/nf-core/pixela…

Pipeline release! nf-core/pixelator v2.1.0 - nf-core/pixelator 2.1.0! Please see the changelog: github.com/nf-core/pixela…

Pipeline release! nf-core/pixelator v2.0.0 - nf-core/pixelator 2.0.0! Please see the changelog: github.com/nf-core/pixela…

Pipeline release! nf-core/oncoanalyser v2.0.0 - 2.0.0 - Flame Robin! Please see the changelog: github.com/nf-core/oncoan…

Pipeline release! nf-core/scnanoseq v1.1.0 - nf-core/scnanoseq v1.1.0 - Iron Alligator! Please see the changelog: github.com/nf-core/scnano…

Bring along anything you are working on and meet others in the Asia Pacific Nextflow and nf-core community. For more information and links, see the nf-core blog post: nf-co.re/blog/2025/apac…

Who: - Anyone When: - Wednesdays, 3.00 PM NZDT - Wednesdays, 1.00 PM AEDT - Wednesdays, 12.30 PM ACDT - Wednesdays, 12.00 PM AEST - Wednesdays, 11.30 AM ACST - Wednesdays, 11.00 AM AWST Where: - Gather Town

nf-core weekly help desk is coming to Asia Pacific! After the success of the European and American time zones, help desk is coming to Asia Pacific starting Wednesday, March 12. Join this week's hosts, @awgymer and @Chris_Hakk, and discuss all things Nextflow & nf-core.

Pipeline release! nf-core/demultiplex v1.6.0 - 1.6.0! Please see the changelog: github.com/nf-core/demult…

Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå! Please see the changelog: github.com/nf-core/sarek/…

I thought I'd post it first, but Sara beat me to it... We have published SAMURAI, a reproducible pipeline to analyze data from shallow whole-genome sequencing experiments, leveraging the great @nf_core framework and @nextflowio. academic.oup.com/bib/article/26…

Pipeline release! nf-core/nanostring v1.3.1 - v1.3.1 - 2025-01-20 - Micrometre patch! Please see the changelog: github.com/nf-core/nanost…

@mvanins @coregenomics @NatRevMCB We have a components cheat sheet and a few other bits that might help :) nf-co.re/docs/guideline…

@coregenomics @NatRevMCB I agree! I think they're also very good for summarizing sequencing data processing pipelines (like @nf_core uses). I wish they were easier to draw though!

Now Online: Sequencing technologies to measure translation in single cells bit.ly/3PEoqOW