Petra P
2.3K posts

Petra P
@ppjevac
microbial ecologist, fan of mud, water and dirt dwelling bugs, and your personal microbiome research consultant @JMF_Vienna
Wien, Österreich Katılım Eylül 2016
532 Takip Edilen1K Takipçiler

Ecstatic to announce that I've been awarded a Marie Curie Postdoc Fellowship #MSCA to work with Don Canfield @Nordcee and alongside Jonathan Brewer @DambicDK to invesigate sponge anaerobic metabolism-associated pathways via targeted experiments coupled with #MERFISH @SyddanskUni


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Our study on drug-gut microbiome interactions is out! 🦠💊 @NatureMicrobiol
We show that the #Parkinson's drug entacapone induces iron deficiency in microbes, leading to selective inhibition of microbial activity.
Check the full story here: rdcu.be/d0ZAQ
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I'm excited to share that I'll lead a new Center of Excellence for Metaproteomics, a joint venture between the University of Vienna and Bruker. This initiative will leverage cutting-edge mass spectrometry and AI to unravel the mysteries of the microbiome.
medienportal.univie.ac.at/en/media/recen…
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Ein @ERC_Research Synergy Grant, der mit 9,9 Millionen Euro dotiert ist, geht an ein internationales Team – 2,5 Millionen Euro davon erhält die Mikrobiologin Katharina Kitzinger von der Uni Wien.🎉
Mehr dazu: ⤵
medienportal.univie.ac.at/media/aktuelle…
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Fun, and some "lampenfieber" was had our first green screen video shoot. @Lou_tsia the recorded material, were we explain the global C and N cycles, will become part of the @univienna MOOC on Environmental Emergencies.
Very exciting to be part of it!

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Unser @FWF_at Cluster of Excellence @MicrobesPlanet
im Arte-Dokumentarfilm über die "Macht der Mikroben". Herzlichen Dank an die Filmemacherin Marie-Monique Robin @m2rfilms und ihr Team für die Einladung. Hat sehr viel Freude gemacht.
arte.tv/de/videos/1156…

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📢 A new #PhD position in #millipede #gut #microbiome and processes using #omics and #stable_isotopes will be opening in my lab next year.
isme-microbes.org/jobs/phd-posit…
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Important finding by @KerrinSteensen that non-tailed and filamentous prophages dominate over tailed prophages in Vibrio when using unbiased predictions. Lots of interesting biology uncovered as well.
academic.oup.com/ismej/advance-…
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Amazing new bacterial predatory mechanism. Congratulations to the Pilhofer lab and thanks for making us part of this study.
science.org/doi/10.1126/sc…
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Widespread occurrence of dissolved oxygen anomalies, aerobic microbes, and oxygen-producing metabolic pathways in apparently anoxic environments |academic.oup.com/femsec/advance…
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Danke @FWF_at für das tolle Video!
FWF@FWF_at
Die Umweltmikrobiologin Barbara Bayer will herausfinden, wie die #Überdüngung von Seen und Meeren den natürlichen #Methankreislauf beeinflusst und welche Prozesse genau dahinterstehen. 🌊🦠 #scilog Video ▶️ @BarbaraBayer90 scilog.fwf.ac.at/magazin/was-mi…
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I'm excited to share that I've been promoted to Full Professor in Microbial Physiology at @Radboud_Uni @RIBESresearch! Thank you to everyone who has made this success possible - my mentors, co-workers, collaborators, and colleagues. Looking forward to what there is to come!
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A new substrate for #nitrification by #comammox microbes: #Guanidine
So glad to see this out in @Nature today – great collaborative effort from our @FWF Cluster of Excellence, @univienna, team @aalborg_uni, and @UFZ_de
nature.com/articles/s4158…

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@kirk3gaard @illumina @aalborg_uni @nanopore @qiime2 Do you want to guess what we are up to @JMF_Vienna? ;)
The nostalgic relationship of many folks towards amplicons is, btw, not emotional but financial. They still have their place, even with primer biases in place.
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@illumina @aalborg_uni For people keen on doing amplicons nowadays it would be valuable to have ASV/OTU style processing from @nanopore data. Anyone developing this? @qiime2 ? #DADA2? The data quality should be sufficient?
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I was finally allowed to unplug the old @illumina MiSeq after many years in the lab @aalborg_uni . It has been essential in many papers to have this in house but in recent years it has been kept operational mostly for people who had a nostalgic relationship with their amplicons.

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very happy to see our work on water-soluble polymer biodegradation published in @EnvSciTech big congratulations @AKintzi on first phd publication! many thanks to collaborators, reviewers, and editor for all the support!
EDGE - Environmental Geosciences@EDGE_Vienna
How to assess the biodegradation of water-soluble polymer by wastewater microorganism? Check out our new @EnvSciTech study on adapting standard biodegradation tests for water-soluble polymers. pubs.acs.org/doi/10.1021/ac…
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Super usefull resource for microbial genome mining @daanspeth nade available here!
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Check out our new preprint!
Thanks to magical skills of @KatarinaKajan we were able to go deep into metabolic niches developed along depth in an anchialine cave!
Together with @Sandi91752899 @ppjevac @kirk3gaard
biorxiv.org/content/10.110…
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@environmicrobio monobromobimane derivatisation and HPLC.
frontiersin.org/journals/micro… has references for measurement of all relevant reduced sulfur species.
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Job alert! 📢 I am offering a 2-year position for a bioinformatician. 💻 They will have to organise a database and pipeline to analyse antibiotic resistance genes. 🦠 The job is at the @mncn_csic and is funded by the Spanish National Plan. Contact me if you are interested!
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