Robin Andersson

3.6K posts

Robin Andersson banner
Robin Andersson

Robin Andersson

@robin_andersson

Computational genomicist. Interests include transcription and transcriptional regulation. Assoc. Prof. at Univ. of Copenhagen. @randersson.bsky.social

Copenhagen Katılım Ocak 2011
713 Takip Edilen2.3K Takipçiler
Robin Andersson
Robin Andersson@robin_andersson·
Latest from the lab! Led by @XueningHe922, establishing a framework for interpretation of the motif syntax of regulatory elements and a quantitative model for TF cooperativity. Plenty of cool stuff revealed, including TF redundancy and synergy, and their regulatory roles!
Xuening He@XueningHe922

Excited to share DeepCompARE + ISA - a lightweight deep learning model + efficient interpretation method, to uncover rules of TF cooperativity via genome-wide in silico motif ablations! Preprint: biorxiv.org/content/10.110… Github: github.com/anderssonlab/D…

English
1
0
7
491
Robin Andersson
Robin Andersson@robin_andersson·
Check out our latest work, scE2G, for mapping the target genes of enhancers from single cell data! biorxiv.org/content/10.110…. See 🧵 below for highlights Amazing work led by co-first authors @mayayayas and @613weilin in a great collaboration with @jengreitz 's lab
Wei-Lin Qiu@613weilin

Excited to share our latest preprint on scE2G – a new model to link enhancers to target genes using single-cell data – with state-of-the-art performance across multiple perturbation benchmarks. biorxiv.org/cgi/content/sh… Read more below! 1/12

English
0
6
22
2.4K
Robin Andersson retweetledi
Albin Sandelin
Albin Sandelin@albin_san·
Happy to share our joint work with the Falsig Pedersen group on how the physical microenvironment can drive cells to acquire cancer hallmarks. cell.com/cell-reports/f… . In solid tumors, niches with low pH are common. We show that pancreatic cancer and normal organoids...(1/N)
English
2
1
4
727
Anja Groth 🇺🇦
Anja Groth 🇺🇦@groth_anja·
Honored to receive an ERC Advanced Grant to study the interaction of the chromatin landscape with 3D genome organization in Epigenetic Cell Memory 🎆 🍾 Very excited to start exploring these basic mechanisms that maintain cell identity across our lifespan 🤩 @GrothLab @UCPH_CPR
European Research Council (ERC)@ERC_Research

📣 Good news today for 255 outstanding research leaders who have been offered ERC Advanced Grants. The new funding, worth nearly €652 million, is part of the 🇪🇺EU’s #HorizonEurope programme. Read more 👉 europa.eu/!TkwhWc #ERCAdG #FrontierResearch @EUScienceInnov

English
32
7
234
22.1K
Robin Andersson retweetledi
Rasmus Siersbæk
Rasmus Siersbæk@RSiersbaek·
Sooooo excited to share the first paper from the lab now online @NatureGenet 😀😀😀 Interested in MYC, transcriptional mechanisms and (breast) cancer? Check it out👉rdcu.be/dAAht. Short summary thread 👇
English
12
14
79
12.2K
Robin Andersson retweetledi
Bo Xia
Bo Xia@BoXia7·
A true curiosity-driven journey, fulfilling one of my childhood dreams! The tail loss marks a pivotal evolutionary step towards humans and apes. But how did it happen? rdcu.be/dzTba @ItaiYanai @JefBoeke
Itai Yanai@ItaiYanai

How did we lose our tail? A simple question.. but it wasn't really asked before! We discovered a plausible scenario for the genetic mechanism that led to tail loss. Amazing that such a big change may have been caused by such a small genetic event. nature.com/articles/s4158… @BoXia7

English
17
83
446
76K
Robin Andersson retweetledi
Jesse Engreitz
Jesse Engreitz@jengreitz·
An encyclopedia of enhancer-gene regulatory interactions in the human genome twitter.com/argschwind/sta… Very proud—4 years in the making, huge team effort. This is a paper where the author list cannot convey everyone's incredible contributions. My holiday highlights below: 1/
Andreas Gschwind@argschwind

Excited to share our latest work on bioRxiv! biorxiv.org/content/10.110… A highly collaborative effort with @ksmualim @karbalayghareh, @mayayayas, @kanishkadey, @evelynjagoda,@WangXijhu, @LarsMSteinmetz, @anshulkundaje, @jengreitz and many others from @ENCODE_NIH! Thread👇

English
3
37
156
36.1K
Robin Andersson retweetledi
Cedric🧬➰🧬Feschotte
Cedric🧬➰🧬Feschotte@CedricFeschotte·
“Transposable elements contribute to nearly 80% of human-specific candidate cis-regulatory elements in cortical cells” 🧠 …🤯 literally! Amazing dataset 🔥 Congrats to all involved! nature.com/articles/s4158…
English
2
108
419
42.1K
Robin Andersson retweetledi
Anders Sejr Hansen
Anders Sejr Hansen@Anders_S_Hansen·
Come and join us! We are looking to recruit a Research Assistant/Technical Associate I to join our team Summer 2024. This could be an ideal position for someone looking for 2 years of research experience before starting graduate school. Apply: careers.peopleclick.com/careerscp/clie…
Anders Sejr Hansen tweet media
English
1
28
43
11K
Robin Andersson retweetledi
ENHPATHY
ENHPATHY@enhpathy_H2020·
Congratulations to all our students who have done an excellent work as part of our @HorizonEU network over the last 3 years. Our @EMBO workshop starting today is a great opportunity to add a new dimension to their scientific careers. #EMBOenhanceropathies @MSCActions
ENHPATHY tweet media
English
1
11
35
3.2K
Brad Bernstein
Brad Bernstein@BradEBernstein·
Honored to be included among this remarkable group. Many thanks to the NAM! And many thanks to the brilliant colleagues and trainees I’ve had the privilege of working with over the years!
Dana-Farber News@DanaFarberNews

Bradley Bernstein, MD, PhD (@BradEBernstein), Chair of Cancer Biology at @DanaFarber, has been elected to the National Academy of Medicine (@theNAMedicine) for demonstrating outstanding professional achievement and commitment to service. Press release: ms.spr.ly/60139s3e3

English
32
15
268
52.6K
Robin Andersson
Robin Andersson@robin_andersson·
This will be my (academic) home during the fall. On a sabbatical at the Broad, kindly hosted by @kasper_lage and the @novonordiskfond center for genomic mechanisms of disease. Looking forward to lots of interactions and awesome science! Reach out if you want to meet up!
Robin Andersson tweet media
English
6
2
66
12.7K

Keşfet

@XueningHe922 @mayayayas @613weilin @jengreitz @groth_anja @UCPH_CPR @NatureGenet @ItaiYanai