Yohann Potier

127 posts

Yohann Potier

Yohann Potier

@ypotier

data @TesseraTx. Distracted from distraction by distraction.

Boston, MA Katılım Eylül 2008
2.5K Takip Edilen145 Takipçiler
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Manuel Llinas
Manuel Llinas@LlinasLab·
And so it begins…
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Pearl Freier
Pearl Freier@PearlF·
15 countries incl Egypt, Canada & Australia are ahead of US in their potential to eliminate hepatitis C in their countries during this decade according to story attributing the data to nonprofit Center for Disease Analysis Foundation @CDAFound nytimes.com/2024/04/28/hea….
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Ash Jogalekar
Ash Jogalekar@curiouswavefn·
Shoutout to Dover publications which has republished some of the greatest science and math books of the 20th century. What's your favorite?
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NumFOCUS
NumFOCUS@NumFOCUS·
❗Sponsor Update❗ We are thrilled to add @TesseraTx to the growing list of NumFOCUS corporate sponsors! Thanks for your support and the impact you're making on the Open Source Community! 😃
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Eric Wastl
Eric Wastl@ericwastl·
For the ninth(!) year in a row, I will be releasing 25 programming puzzles over the first 25 days of December over on adventofcode.com! It's completely free thanks to AoC++ supporters and thanks to sponsors. If you want to check it out early, all past puzzles are still up!
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Natalie Ma
Natalie Ma@NatalieMaPhD·
Struggling to keep up with the explosion of software in the life sciences? We were too. So we built the life science software landscape, a map of >300 software products in preclinical R&D, organized by function and specialty. deeporigin.com/post/life-scie… #biotech #techbio #SaaS
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Ming "Tommy" Tang
Ming "Tommy" Tang@tangming2005·
Serious Q: What's the difference between bioinformatics and computational biology? I got this question from a father who wants to choose a major for his daughter in college by email.👇 🧵
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Vivek Mutalik
Vivek Mutalik@vivek_mutalik·
Whitehouse released much awaited executive order report 🔥 on “Bold goals for biotech & biomanufacturing” One of the 😳goals: “In 5 years, sequence the genomes of one million microbial species and understand the function of at least 80% of the newly discovered genes” 🤯
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Mike Vella
Mike Vella@vellamike·
.@nanopore is moving from FAST5 to POD5 - a raw data format based on @ApacheArrow. You can convert your FAST5 files using a browser-based tool we built using WebAssembly! (Runs locally, no data leaves your device). pod5.nanoporetech.com
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Jesse Johnson
Jesse Johnson@jejomath·
I’m excited to announce that we’ve finished production on my mini-book about the Reciprocal Development Principles for embedded #biotech #data teams. The kind folks at Saturn Cloud have covered the editing and publishing costs so that we can make it available for free.
Saturn Cloud@saturn_cloud

Fresh off the press! 📢 Our Leading Biotech Data Teams Report is now available with @jejomath. Supercharge your Biotech startup with this free report here: saturncloud.io/get-content/le… #Biotech #DataScience #Innovation

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Yohann Potier
Yohann Potier@ypotier·
@Ubunta @Polar Glue job if you’re using AWS. Because of the size Python for spark or EMR could be useful but you could try a simple jdbc connection to MySQL and parquet output.
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ABC@Ubunta·
What is the least painful way of converting MySQL table ( 600gb+) to parquet? 🥺 Spark is keep popping up OOM exception, can't catch up with node ⚡Python read by month & writing. Launching multiple pods by months Is there any @Polar way of readying and syncing to Parquet 🤔?
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Robert Aboukhalil
Robert Aboukhalil@RobAboukhalil·
🥳 New on sandbox.bio: Bioinformatics debugging puzzles! Featuring file format issues that are common in bioinformatics. See if you can debug your way out: sandbox.bio/tutorials?id=d… Let me know if you have ideas for other common bioinformatics command-line issues.
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Daniel Rigden
Daniel Rigden@DanielRigden·
A pleasure and a privilege to be assessor again at #CASP15. A mix of spectacular success and the occasional intriguing failure. Looking forward to hearing from the predictors and discussing future directions. Thanks @AJSimpkin @rmk_ccp4 @shah_comp526 @DavidLMurphy3 Filo and Luc.
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Bits in Bio
Bits in Bio@bitsinbio·
Want to influence the next generation of software in the life sciences? Fill out this survey: cradlebio.typeform.com/biodev2022
Nicholas Larus-Stone@nlarusstone

I am so excited to announce the 2022 @bitsinbio x Cradle Bio Biodeveloper Survey!!!! This survey is inspired by the Stack Overflow dev survey and has 3 purposes: - community - tools - problems Everyone who works in life sciences or software for life sciences should participate!

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Liang Chang
Liang Chang@liangc_science·
8 Books about Biotech/Pharma Companies
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Anne Carpenter, PhD
Anne Carpenter, PhD@DrAnneCarpenter·
3 years of work... the JUMP-Cell Painting Consortium has now released the world's largest public Cell Painting dataset! 117,000 compounds, 13,000 overexpressed genes, 8,000 gene knockdowns, w/images and extracted profiles 🤯 Data @ Cell Painting Gallery: github.com/jump-cellpaint…
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