Thinh Tran

I'm #PhDone! So incredibly thankful for everyone at the Schultz lab, Clinical Data Mining, @GSKGradSchool @CompOncMSK for your amazing support during the past years. It took a village to get here - I could not have done it without you!

It took me a long time but I finally learned how to focus only on things that I can control, such as my mental health and the number of fixed effects I can add to my regression.

Work on Open Source Software for a summer and support Cancer Research! Paid internship - any age any background! Flexible schedule (175h or 350h projects) Read more: github.com/cbioportal/gsoc

@nkonst4 @ClaudeDesplan @Holguera_Isabel @tonymrossi This whole story is so amazing to read! Congrats on a legendary postdoc Nikos!

Finally, it's out! And much improved after the review process. A great farewell from @ClaudeDesplan's lab. Importantly, it was a very enjoyable collaboration between three equally contributing first authors, @Holguera_Isabel, @tonymrossi, and myself. nature.com/articles/s4158…

@NewHavenDOT We called PD twice today about our car and one operator said they had no information, the other said PD "is not in charge of parking." Our ticket online had no information about towing companies. Left a voicemail with TT&P. When should we expect to find it?

Reminder: Information on towed vehicles can be found by calling the Police Department: 203-946-6316. Alternatively, you can go to tocite.net/newhavenct/por… -use the license plate number to search for information on your vehicle.

@MayorElicker We called PD twice today about our car and one operator said they had no information, the other said PD "is not in charge of parking." Our ticket online had no information about towing companies. Should it be this hard getting our car back?

For towed vehicles: Information on towed vehicles can be found by calling the PD: 203-946-6316 or going to the following link tocite.net/newhavenct/por… #NHV #Newhaven

OncoKB, @sloan_kettering MSK's precision oncology knowledge base, is now the first somatic human genetic variant database to achieve partial recognition by the @US_FDA! Read the announcement below, and visit our updated website at oncokb.org. fda.gov/drugs/resource…

I am very excited to present to you my last paper from @ClaudeDesplan's lab. A fun collaboration with @tonymrossi that started many years ago, when we were trying to find ways to identify all transcription factors in the temporal series of the medulla neuroblasts.

Molecular profiling of multiple serial tumor biopsies from a #melanoma patient treated with immune checkpoint inhibitors, uncovers changes in the tumor microenvironment occurring during treatment resistance. nature.com/articles/s4159… #MelanomaAwarenessMonth @gmboland @dliu_ccb

cancer biology via @xkcd

When I grow up, I'd wanna be like Claude. He's smart, funny, inspiring, and by making time for me when I was a lowly undergrad, he convinced me that a career in science would be the best career. Thank you, Claude. dev.biologists.org/content/147/23…

My Master's thesis is now published! I laughed, cried and almost quitted along the way, but I had the best mentors to keep me going. Thank you @garybader1 and everyone in the Bader lab esp. @PatternsNGames @InnesBrendanT - this could never happen without you.

New Yorkers Planning 2-Minute Clap For Essential Workers On Friday gothamist.com/arts-entertain… #ClapBecauseWeCare

Check out our @AnnualReviews article on deciphering cell fate decision by integrated single-cell analysis: annualreviews.org/doi/abs/10.114…

Our @ruth_isserlin @garybader1 paper: showing how cell cycle duration can fine tune cell number, cell diversity and cell proportion in a developing tissue.

@GygiLab Many biologists are interested in how well RNA and protein expression correlate. We confirmed that they have middling correlation on average (~0.5). But the scope of these data let us ask this on a per-gene level across many tissue lineages. (3/13)

Interested in single cell genomics but need help getting started? Check out the agenda for my lab's free workshop next Friday. Very excited that we will be livestreaming all talks with the support of @cziscience! Please RT and spread the word! satijalab.org/scgd

Apply to @sloan_kettering Gerstner Sloan Kettering Graduate School of Biomedical Sciences (@GSKGradSchool) to do your PhD in clinical research & basic sciences. Deadline: Monday, 12/2. ✅No GRE requirement ✅No application fee sloankettering.edu/gerstner/admis…

We (with Aviv Regev) want to share with you our preprint scPhere(biorxiv.org/content/10.110…), a deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces @humancellatlas