Pengyu Ren

445 posts

Pengyu Ren

@prenbme

Professor. BME. Molecular Modeling & Biomedical Engineering. Tinker & AMOEBA(+). @qubit_pharma. Opinions are my own.

UT Austin شامل ہوئے Temmuz 2010

1.1K فالونگ1.2K فالوورز

Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·15 Ara

We have received numerous sollicitations regarding the Hyperion-1 quantum emulator, thank you everyone! For those who asked, yes Hyperion-1 is under test on @AMD and @Intel GPU platforms. Working on the logo right now 😃!! Stay tuned, more results are coming soon. @sorbonne_univ @LCT_UMR7616 @qubit_pharma #quantumcomputing #compchem #hpc #supercomputing #gpu

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Jean-Philip Piquemal@jppiquem·6 Ara

Today we released some news about our new software developed in collaboration with @qubit_pharma. Hyperion-1 is a massively parallel, GPU-accelerated, state-vector quantum emulator designed to explore the 30++ (exact) qubits regime. Huge thank to the team: @OlivierApp @ChemCesar @EPosenitskiy Louis Lagardère #quantumcomputing #compchem @Genci_fr @nvidia #HPC #supercomputing #GPU thequantuminsider.com/2023/12/06/qub…

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Qubit Pharmaceuticals@qubit_pharma·20 Kas

Great talk by J. Huang @nvidia at the #aiPULSE conference by @Scaleway about the importance of having control over the hardware to be able to stay at the forefront of the AI & digital revolution. Thanks a lot for mentioning us as key players in the field! lnkd.in/emPDC_Kg

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·16 Kas

#compchem New #preprint: Incorporating Neural Networks into the AMOEBA Polarizable Force Field. Nice work by Yanxing Wang and @JaffrelotT. Another great collaboration with the @prenbme group (@leucinw) doi.org/10.26434/chemr…

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Jean-Philip Piquemal@jppiquem·27 Eki

#compchem Just published in JCTC @JCIM_JCTC: Cooperativity and Frustration Effects (or Lack Thereof) in Polarizable and Non-Polarizable Force Fields. Congrats @_jnochebuena & fun project with old friends: @CisnerosRes and @shubinliu. @TINKERtoolsMD dx.doi.org/10.1021/acs.jc…

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·15 Haz

The Tinker meeting @TINKERtoolsMD is starting with Michael J. Schnieders @uiowa : CpHMD and Crystal Polymorph Algorithms for AMOEBA #tinkermeeting23 #compchem

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Pengyu Ren ری ٹویٹ کیا

Jaffrelot Inizan Théo@JaffrelotT·4 Nis

@ChemicalScience Tutorial link: github.com/TinkerTools/ti… Deep-HP is here to combine #MachineLearning potential with @TINKERtoolsMD to run large #BiomolecularSimulations Big Thanks to @jppiquem @Thomas__Ple @OlivierApp @olexandr @prenbme @ERC_Research @Genci_fr

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·4 Nis

Great work by @JaffrelotT,@Thomas__Ple,@OlivierApp. Nice collaborations with @olexandr & @prenbme. Funding @ERC_Research (project EMC2); Supercomputer time @Genci_fr

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Pengyu Ren@prenbme·3 Mar

@D_EmmaFan Congratulations!

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Prof. D. Emma Fan, UT-Austin; scientist & inventor@D_EmmaFan·2 Mar

Dr. Fan received the promotion to Full Professor. UT-Austin sets a rigorous standard for promotion to its highest rank. Dr. Fan is considered as having "exceeded these requirements" (thanks for the review) and received many congratulations from her colleagues😊

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Pengyu Ren@prenbme·13 Oca

@jppiquem @HPC_Hyperion @OlivierApp @LCT_UMR7616 @Luc_Henri_Jolly @qubit_pharma Congratulations!

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Jean-Philip Piquemal@jppiquem·12 Oca

Nice package in my mail this morning. Thanks @HPC_Hyperion for highlightning our work. #HPC #supercomputing

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Jean-Philip Piquemal@jppiquem·29 Kas

Honored to receive the HPC Innovation Excellence Award(@Hyperion_HPC/ #HPC User Forum) for our SARSCoV2 #compchem works. Kudos to the team @LCT_UMR7616 & @qubit_pharma. Thanks to @Genci_fr @PRACE_RI @awscloud for support. EMC2 @ERC_Research #supercomputing hpcwire.com/off-the-wire/h…

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·18 Ara

#compchem Preprint: 𝛽-actin plasticity is modulated by coordinated actions of histidine 73 methylation, nucleotide type, and ions. Great work by @AdrienSchahl from a long collaboration with @Matth_Chavent. Big thanks @prenbme @misterwalker. @TINKERtoolsMD doi.org/10.1101/2022.1…

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Qubit Pharmaceuticals@qubit_pharma·1 Ara

We are very pleased to announce a strategic collaboration with @NVIDIA to develop a world leading #HPC- #Quantumcomputing platform to accelerate #drugdiscovery!🚀 We will benefit from NVIDIA's #DGX infrastructure together with #QODA and #CuQuantum blogs.nvidia.com/blog/2022/11/3…

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Pengyu Ren@prenbme·23 Kas

@JustinLemkulVT @jpotoff Years ago I tried CAREERS 3 times and failed 3 times. Then I had one app with a couple of E but not funded. If I had to rely on NSF I would not have a career.

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Justin Lemkul@JustinLemkulVT·23 Kas

@jpotoff Like, “this part is good, but here’s why it’s actually pretty bad…”

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Justin Lemkul@JustinLemkulVT·23 Kas

Part of the reason my latest CAREER application sunk. One Reviewer (rated me Poor, other two VG) said they didn’t believe several of the experiments that set the premise and some validation for what I proposed. No way I could win with that kind of criticism.

Tamir Gonen@gonenlab

Reviewers of our paper asked for experiments that exist in the literature. So we referred to 4(!) pubs with said experiments. Rejected. Reviewer 1 says they dont believe the published literature. What happened science? When did it turn to a belief rather than data driven system?

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Pengyu Ren@prenbme·29 Eki

@XuhuiHuangChem Congrats!

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Xuhui Huang@XuhuiHuangChem·29 Eki

Super happy to receive this NIH R01 score! 😀😀😀😀😀😀

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Jean-Philip Piquemal@jppiquem·5 Eyl

Pengyu Ren @prenbme and I will start a @ResultsinChem Virtual Special issue dedicated to #compchem. I have still a few vouchers so if you have a good paper that could fit, contact me.

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·18 Ağu

#compchem New preprint: Scalable Hybrid Deep #NeuralNetworks/Polarizable Potentials Biomolecular Simulations including Long-range Effects. Great work by @JaffrelotT @Thomas__Ple @OlivierApp & collabs: @olexandr @prenbme. EMC2 @ERC_Research, #HPC @Genci_fr arxiv.org/abs/2207.14276

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Pengyu Ren@prenbme·16 Tem

@jppiquem @JaffrelotT @LCT_UMR7616 @Sorbonne_Univ_ @UTAustin Welcome to @UTBiomedical!

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·16 Tem

Congrats to @JaffrelotT, PhD student in our group @LCT_UMR7616 @Sorbonne_Univ_ , who is laureate of the prestigious 2022 𝐅𝐮𝐥𝐛𝐫𝐢𝐠𝐡𝐭 𝐅𝐞𝐥𝐥𝐨𝐰𝐬𝐡𝐢𝐩. He will spend several months in US visiting Prof. @prenbme @UTAustin to conduct his #compchem research project.

Fulbright France@FulbrightFrance

Nous souhaitons un plein succès à la promotion 2022 ! 🇺🇸🇫🇷✨

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Pengyu Ren ری ٹویٹ کیا

Jean-Philip Piquemal@jppiquem·8 Tem

Please RT. #compchem We are looking for an experienced #HPC engineer to work on various GPU optimizations of the Tinker-HP software @TINKERtoolsMD. Please contact me if interested. This position is funded by @ERC_Research (project ERC EMC2) and oriented towards exascale computing

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Pengyu Ren@prenbme·11 Haz

@EA_Cairns chrome.google.com/webstore/detai… Extension

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Elizabeth Cairns@EA_Cairns·21 May

Tired of having to go through your library's website to access articles while working from home? (And your VPN won't do) Try out this hack that I've been using, using Chrome's built-in search function #AcademicChatter

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دریافت کریں

@AMD @Intel @sorbonne_univ @LCT_UMR7616 @qubit_pharma @OlivierApp @ChemCesar @EPosenitskiy