John Huddleston

For the last three years, I’ve worked with @richardneher and @trvrb to develop models to make long-term forecasts of seasonal influenza evolution. Our results are now available in eLife (elifesciences.org/articles/60067) and summarized on our blog (bedford.io/blog/predictin…).

I am so grateful to have spent my PhD in @trvrb's lab and the scientific community of Seattle. I couldn't have asked for better lab mates or congratulatory treats than these.

@joshpowellphd @richardneher @trvrb Thank you! Social distancing will most likely introduce a lot of randomness to which clades dominate in the next season (such as it is). The most recent sequences are all A1b/94N, but these are all from Cambodia (nextstrain.org/flu/seasonal/h…).

For the last three years, I’ve worked with @richardneher and @trvrb to develop models to make long-term forecasts of seasonal influenza evolution. Our results are now available in eLife (elifesciences.org/articles/60067) and summarized on our blog (bedford.io/blog/predictin…).

For more about the context of our forecasting efforts, check out the excellent insight article written by @aperofsky and @swientist (elifesciences.org/articles/62955).

In a little over a year, dms-view.github.io went from an idea in @AdamDingens’s mind to a prototype for @jeffrey_heer’s data viz class last spring by @khrystyna_north, @alliblk, Sarah Hilton, and me, to publication in JOSS and regular use by @jbloom_lab.

Our paper describing ten recommendations for supporting open pathogen genomic analysis in public health is out today in Nature Medicine! nature.com/articles/s4159…

@HollyStessman @zevkronenberg @kendra_hoekzema There will always be a place for manual tweets.

Initial FASTQ release of human NA12878 @nanopore whole-genome dataset available here (29 flowcells!) github.com/nanopore-wgs-c… #nanoporeconf

@3rdreviewer @KMS_Meltzy These coordinates are in Supplemental Table S11 (supplement to be posted with the paper is officially published).

@arthur5ko You would be SO qualified...

The Eichler lab is looking for a skilled programmer who knows biology and loves big data. Tell your friends. tinyurl.com/j5taubr

Used #cfncluster and #mosh for the first time this week. The future is now. If only I had time to tackle #d3...

@zevkronenberg Re: which direction human/Neanderthal introgression occurred biorxiv.org/content/biorxi…

@calkan_cs Whereas we know truly ancient history started Jan 1, 1970.

#sixseasonsandamovie for what it's worth without harmon...

@GuchidaWasTaken The future is now!

@IanGClifton This reminded me of you: http://xkcd.com/810/

@johannabrown nice.

<3 testing with QUnit