PathGenEvo Cam me-retweet
I'm pleased to announce the second edition of our "Working with Bacterial Genomes" course is now open for registration: training.cam.ac.uk/bioinformatics…
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PathGenEvo Cam
26 posts
PathGenEvo Cam
@PathGenEvoCam
Pathogen Genomics and Evolution Group at the University of Cambridge Vet School
Bergabung Kasım 2021
98 Mengikuti363 Pengikut
PathGenEvo Cam me-retweet
Very pleased to share a a small study a long time in the making:
Colonization and transmission of Staphylococcus aureus in schools: a citizen science project microbiologyresearch.org/content/journa…
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PathGenEvo Cam me-retweet
In a new blog, @princeasaregh discusses his bioinformatics journey at @NMIMR_UG in Ghana and @PathGenEvoCam in Cambridge.
cambridge-africa.cam.ac.uk/cambridge-afri…
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PathGenEvo Cam me-retweet
Our paper looking at Mycobacterium avium Complex genomics and transmission in a London hospital is out in ERJ:
erj.ersjournals.com/content/early/…
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PathGenEvo Cam me-retweet
🚨 Our new preprint is up 🚨
biorxiv.org/content/10.110…
We show that mutational spectra enable inference of local SARS-CoV-2 replication niche within the respiratory tract
Thread below 🧵 1/10
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PathGenEvo Cam me-retweet
From @DorothyYeboahM1's @DYMLab_NMIMR in @NMIMR_UG, currently @CamVetSchool with the @PathGenEvoCam group on a collaborative research project supported by @AfrResExFund and @CambridgeAfrica. I was warmly received by my host sponsors @JulianParkhill @jw132 @Triedzi on the 1st day
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PathGenEvo Cam me-retweet
🚨 Our new preprint is up 🚨
biorxiv.org/content/10.110…
We show that we can use mutational spectra to predict bacterial niche and transmission routes
Thread below 🧵 1/14
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Welcome to the group @princeasaregh. We're looking forward to working with you over the next few months
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Noémie Lefrancq@noemielefrancq
Our article on Global spatial dynamics and vaccine-induced fitness changes of Bordetella #pertussis is out in @ScienceTM! Using #phylogenetic models, we investigate #pertussis spatial #spread, and #fitness shifts in response to vaccine changes. 🧵1/10 science.org/doi/10.1126/sc…
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PathGenEvo Cam me-retweet
To help examine potential SARS-CoV-2 recombinant lineages, I've written bammix which examines potential mixtures at a set of positions in a BAM file
Docs and installation instructions at github.com/chrisruis/bamm…
@PangoNetwork 1/3
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PathGenEvo Cam me-retweet
#Microbio22 come and see my poster! It’s arms reach from bar 2…..and learn about evolution of Streptococcus equi too 😀
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PathGenEvo Cam me-retweet
Congratulations to @Doktor_Basti, Theresa Feltwell, @JulianParkhill and @DrFranShort which won the best #PathogDis article for 2021! 🎉 We interviewed all the authors to find out the inspiration behind this paper @PathGenEvoCam
fems-microbiology.org/communities/pa…
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Well done particularly to Fran and Seb who drove this work.
Cambridge Vet School@CamVetSchool
Congratulations to the Parkhill group, who have won the best 2021 article award of the FEMS journal Pathogens and Disease! fems-microbiology.org/communities/pa… @Doktor_Basti @JulianParkhill @AmotherT @DrFranShort
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PathGenEvo Cam me-retweet
Our collaboration with Imperial College and the Royal Brompton Hospital looking at transmission of Mycobacterium avium Complex species is now out in medRxiv:
medrxiv.org/content/10.110…
@DrKartikKumar @RBandH @PathGenEvoCam @o_cookson @MoffattMiriam @JulianParkhill @mloebinger
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PathGenEvo Cam me-retweet
The John Maddox Prize 2021 goes to Elisabeth Bik, @MicrobiomDigest, Microbiologist and Science Integrity Consultant @SpringerNature
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PathGenEvo Cam me-retweet
We're pleased to announce that our work looking at bovine TB transmission between badgers and cattle using isolates from the RBCT is now out in PLoS Pathogens: bit.ly/3FW0cJ1
Thanks to our collaborators @APHAgovuk @jw132 @monkeymyshkin @PathGenEvoCam @keithajolley
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PathGenEvo Cam me-retweet
New preprint with @PathGenEvoCam describing a scalable method of analysis from bacterial genomes to epidemiological results bit.ly/3qZgYmc
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PathGenEvo Cam me-retweet
Our #autism #microbiome paper “Autism-related dietary preferences mediate autism-microbiome associations” is out in @CellCellPress today! authors.elsevier.com/c/1e3XWL7PXf05V Thread below (1/n) 👇:
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