DGIdb

Our latest major update is now officially live and described in our preprint!

Help the DGIdb development team understand how we can better promote hypothesis generation and interaction data sets for the biomedical and clinical research community. Take 5 minutes to share how you use DGIdb and what we can improve for your research: forms.gle/ohrk49dmHMPXzY…

DGIdb is currently planning new feature sets for our next development cycle! Features under consideration include the expansion of regulatory and pathways datasets, and more avenues for community engagement. Provide your feedback here: forms.gle/ohrk49dmHMPXzY…

Super excited to announce the preprint for @CIViCdb 1.5 update paper. "Evolution of the open-access CIViC knowledgebase is driven by the needs of the cancer variant interpretation community" biorxiv.org/content/10.110…

Elaine Mardis: More shoutouts to @treehousecancer and @DGI_db for interpretation of RNAseq data and identification of potentially druggable targets.

Our 4.0 paper has been published online for the Database Issue of Nucleic Acids Research! academic.oup.com/nar/advance-ar…

@nevillesanjana @ZDaniloski @virusninja @nygenome @IcahnMountSinai @nyuniversity Very cool to see that @DGI_db played even a small role in this impressive study. Our latest release was just posted on @biorxivpreprint. biorxiv.org/content/10.110…

@mwiberi We’re not aware of such an issue. Do you mind creating an issue describing what you’re encountering and we’ll take a look? github.com/griffithlab/dg…

The new Drug-Gene Interaction Database @DGIdb is live! Integration with crowd-sourced curation and data in network format available via @NDExProject : bit.ly/3kCjGHT Congrats to the whole team! @obigriffith @malachigriffith @HandlerWagner @DGI_db #nciitcr

Major update just released: Integration of the Drug-Gene Interaction Database (@DGI_db v4.0) with open crowdsource efforts. Includes new/updated sources, improved drug normalization, query scores, @NDExProject integration, and more! biorxiv.org/content/10.110…

Shoutout from Elaine Mardis's keynote for the @CG_Consortium annual meeting! It's always exciting to see how our database is being used by others!

Following the update of OmniPath we present our new annotations dataset 🥳 omnipathdb.org/annotations?pr… Characterize a #protein using data from 36 resources! @HumanProteome @DGI_db @DisGeNET #MatrisomeDB #systemsbiology #omics @sysbiomed

@DGI_db (dgidb.org) team is embarking on a major update (v4). If your favorite source of drug-gene interactions or druggable gene categories is missing, now would be a good time to let us know! Feature requests welcome, but major UI refactoring is slated for v5. :)

@onlyalilibit Hi, we have created a github issue, github.com/griffithlab/dg…, in order to add the "FDA approved" and other drug-specific tags to the drugs.tsv download file so that this information will be available.

Funding bill gives $3 billion boost for NIH medical research thehill.com/policy/healthc…

Latest review paper with Fei Wang just came out: Everything you need to know about drug knowledge bases and their applications in biomedical informatics research academic.oup.com/bib/advance-ar…

Our 3.0 paper has been published online at Nucleic Acids Research! academic.oup.com/nar/advance-ar…

.@UCSC Haussler Lab's Lauren Sanders shares her work combining @treehousecancer + @PNOC_kids + @DGI_db for #DIPG research @CI4CC #ci4cc2017

We just got our v3.0 preprint out the door, manuscript in review. #DGIdb 3 is bigger, better, faster! dgidb.org twitter.com/biorxiv_bioinf…