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@SunitJain

{ Opinions = My own } { RT != Endorsement } Senior Data Scientist | Microbiome Initiative @czbiohub @sunitjain.bsky.social

San Francisco, CA Katılım Ekim 2008
432 Takip Edilen401 Takipçiler
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Sean Jungbluth
Sean Jungbluth@seanjungbluth·
Two updates I've been sitting on: 1. I'm an Anthropic Claude Community Ambassador for the SF Bay Area 🌊 2. Speaking at Code with Claude next week on why domain experts still matter in the age of AI — drawn from what we're building at @BioKEAAI claude.com/code-with-clau…
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Nima Alidoust
Nima Alidoust@nalidoust·
In our new blog post, we team up with @NVIDIAHealth to make it possible to map how drug effects cascades through gene regulatory networks.
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Tahoe Therapeutics
Tahoe Therapeutics@tahoe_ai·
It was a pleasure meeting members of the @BerkeleyML community last week! Our team always enjoys connecting with talented students who are passionate about ML x Bio 💙 We’re excited to continue these conversations and are open to speaking with prospective internship and full-time candidates. Check out our careers page (link in comments)
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Nima Alidoust
Nima Alidoust@nalidoust·
We build datasets, train AI models, and use them for the ultimate goal of discovering and developing new medicines, starting from oncology. This joint venture represents another major step towards that and a preview of the business models enabled by our platform.
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Nima Alidoust
Nima Alidoust@nalidoust·
Alloy and Tahoe are seeding the new company and will co-develop the assets leveraging the biologics capabilities of Alloy coupled with Tahoe's datasets and AI models.
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Nima Alidoust
Nima Alidoust@nalidoust·
We have talked a lot about the datasets & virtual cell models that we are building @tahoe_ai. Today, we are announcing a joint venture with 82VS, the Venture Studio of Alloy Therapeutics to develop antibody drug conjugates for two novel targets, discovered using our technology.
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Nima Alidoust
Nima Alidoust@nalidoust·
Over the last year, few institutions have done more for the quest towards virtual cell models than @tahoe_ai, @arcinstitute, and @officialbiohub. Today, in a landmark partnership, we are teaming up to generate the next definitive dataset for virtual cell models, using Tahoe’s Mosaic Technology. This is first of its kind: multi-million dollar investment from each of these orgs coupled with the massive scale Tahoe’s technology enables. 120M+ cells, 225K unique interactions. We will build on the gigantic success of Tahoe-100M (downloaded 250K+ times in less than a year), and the lasting impact of Arc’s scBaseCamp, and Biohub’s CELL x GENE, to fuel the next generation of virtual cell models, whether developed by us or others. It’s morning in biology! Let’s build.
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Karthik Anantharaman
Karthik Anantharaman@KarthikGeomicro·
This is not true! Any phage scientist could tell you that phage are everywhere from sewage, to rivers, to human skin and human gut. Literally everywhere. They are not a barometer of river purity or anything else.
The Times Of India@timesofindia

A groundbreaking study by renowned scientist Dr. Ajay Sonkar has revealed that the #Ganga River remains completely germ-free despite over 60 crore visitors taking holy dips during #MahaKumbh in #Prayagraj, #UttarPradesh. The research shows that Ganga is the world's only freshwater river containing 1,100 types of bacteriophages that naturally purify water by eliminating pollution and killing harmful bacteria. Know more🔗toi.in/L7DmYb

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Jonathan Lambert
Jonathan Lambert@evolambert·
If you're a scientist that serves on an NSF panel that got cancelled today, I'd love to talk to you about it for an NPR story. DM, email or reach out on signal.
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CIGLR
CIGLR@CIGLR_UM·
PLEASE SHARE! 📢 #CIGLR is excited to announce the opening of our 2025 #GreatLakes Summer Fellow applications! There are 7 full-time, 12-week positions paying $10,000 each. Applications are due 09 Feb 2025 at 11:59 pm EST! Eligibility & how to apply: ciglr.seas.umich.edu/2025-great-lak…
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Djenet Bousbaine
Djenet Bousbaine@DjenetBousbaine·
Check out our last pub. from @mfgrp lab! We discovered that skin commensal microbes induce systemic and local B cell responses upon colonization and took advantage of this knowledge to create topical vaccines using engineered skin microbes. Please read the thread for details.
Michael Fischbach@mfgrp

Today we report that an engineered skin bacterium, swabbed gently on the head of a mouse, can unleash a potent antibody response against a pathogen. Could lead to topical vaccines that are applied in a cream. @DjenetBousbaine led the charge... @Nature 1/55

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Karthik Anantharaman
Karthik Anantharaman@KarthikGeomicro·
Come join us! If you use AI (loosely defined) for any microbiology applications, consider applying for these faculty positions. Great dept with amazing colleagues and a supportive environment.
UW-Madison Department of Bacteriology@UWBact

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Karthik Anantharaman
Karthik Anantharaman@KarthikGeomicro·
If you are interested in prophages, we have a new database: Prophage-DB. Check it out and all feedback is welcome biorxiv.org/cgi/content/sh…
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Elliot Hershberg
Elliot Hershberg@ElliotHershberg·
In the past few weeks, there's been an explosion of new tools for programming DNA and RNA 🧬 A thread with everything you need to know about these new results:
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Ben WoOdcroft
Ben WoOdcroft@wwood·
Metagenome taxonomy profilers usually ignore unknown species. SingleM is an accurate profiler which doesn't, even detecting phyla with no MAGs. We applied it to 250,000 metagenomes- in environmental samples 75% lack a genome/MAG (abundance-weighted). A 🧵biorxiv.org/content/10.110…
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