Androo J. Markham

See how experts at Ascend Advanced Therapies are using Oxford Nanopore sequencing to unlock deeper insights into rAAV vectors — improving product quality and accelerating the path to safer gene therapies. nanoporetech.com/about/events/w…

And native barcoding for @nanopore direct RNA sequencing has arrived ahead of @NanoporeConf. Very impressive first runs @genometechlab with >25 million reads (pre-basecalling) per flow cell. Analyzed data forthcoming!

New preprint on hifiasm (ONT)! We can now achieve near T2T human genome assembly using only ONT Simplex reads—in just half a day, with or without ultra-long sequencing. biorxiv.org/content/10.110…

@martinalexsmith Swing by our suite to say hi this week! It's been too long. Lanai 190.

Contents of the #AGBTGM welcome bag(s)

MetaMDBG killing it for #metagenomics assembly! 1. Nicolas Maurice showing how it captures more diversity than metaflye & hifiasm-meta. 2. Gaëtan Benoit @gaetan_benoit presenting new NanoMDBG module that improves it further for @nanopore #genomeinformatics24 #microbialgenomics

Very excited to announce our preprint on adapting the @nanopore Cas9 workflow for R10 flow cells. This is work from the amazing Veronika Scholz and Veronika Schoenrock and team @MGZMuenchen, and is also my very first senior author paper 🧵biorxiv.org/content/10.110…

Catch us at booth 203 at #ASHG24! We’ll be hosting an Industry Education Session, two CoLabs, on-booth activities, and an off-site evening event. Register to make sure you don’t miss out: bit.ly/4husTjR

Introducing NanoCore! A user-friendly software for Nanopore-based genomic surveillance in healthcare facilities. 🖥️Presented in @mSystemsJ, the software's accuracy is equivalent to gold standard short read-based analyses. Read the article: asm.social/28F

After 4 days the P2S can finally relax after 170 Gbp from one @nanopore flowcell. No wash! No reload! This is the regular flowcells. Will be looking forward to test the updated chemistry ones at some point.

Introducing ROBIN. Rapid nanopOre Brain intraoperatIve classificatioN. ROBIN builds on work by many groups and shows how we could reduce turnaround time for full molecular classification of CNS tumours in NHS clinical settings from weeks to hours. medrxiv.org/content/10.110…

We have made a round of performance upgrades to Clair3-RNA. It now supports the RNA004 kit. 🔗github.com/HKU-BAL/Clair3…

lr-kallisto: Long-read sequencing transcriptome quantification biorxiv.org/content/10.110…

Curious about sequencing #RNA directly including mod bases? Register to join me for this webinar (11 July) explaining how #directRNA seq works plus recent updates & how they might work for your research needs! I'll be available for Q&A afterwards too. @nanopore #mRNA Details⬇️

We recently updated the @nanopore #EPI2ME application and a handful of workflows to bring you the IGV browser in app. @beconsta wrote a blog post about this new feature! Check it out: labs.epi2me.io/igv-integration

Can't get enough of the innovation of the Nanopore Community? Don't worry you won't have to wait long for the next #nanoporeconf. We're heading to Boston for NCM. Save the date. Take advantage of our earlybird offer and we'll see you in September: bit.ly/3VdsTLW

We're making several @nanopore datasets available to coincide with #LC2024 #LondonCalling2024. They are available for download now from the #EPI2ME blog. These include; Zymo fecal reference, plasmids, lambda and E. coli and some human reference RNA! labs.epi2me.io/lc2024-datasets

Impressive recent progress on DNA modification detection from @nanopore #NanoporeConf

At @nanopore we have successfully sequenced a yeast chromosome, telomere to telomere, in one read.

The latest blog post from Science unlocked: publication picks from April 2024 nanoporetech.com/blog/science-u… @nanopore

Great webinar on @nanopore ultra long sequencing with great tips @ tricks for human, mammalian and plant species. Thanks all and especially @khmiga and @aphillippy for organising and being great hosts! #T2T