Denis Torre retweetledi
Delighted to share my PhD work on the mechanics of protocadherin 15, an inner-ear protein critical for human hearing, out now in @PNASNews!
Read on to hear👂🏼more!
pnas.org/doi/10.1073/pn…
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Denis Torre
25 posts
Denis Torre
@denistorrre
Postdoc @ MSKCC - Systems Biology, Development, Cancer, Genomics
Manhattan, NY Katılım Kasım 2017
232 Takip Edilen114 Takipçiler
Denis Torre retweetledi
We spent 3.5 hours hiking at the breakneck ridge trail. Thanks to @dapengyang2012 for organizing (again)! The timing was perfect (for the train) and the weather was super nice. Welcome @denistorrre to join the lab!
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Big thank you to Yesai, Ernesto, Ivan, and the rest of the team for the amazing collaboration! (5/5)
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This is accompanied by impaired Pol II elongation and stabilization of prematurely terminated RNAs, which disproportionately affects expression of long, multi-exonic genes (4/5)
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Thrilled to share our work investigating the role of RNA catabolism in regulating ERV expression and stem cell potency! (1/5)
cell.com/molecular-cell…
GuccioneLab@GuccioneLab
Very proud of this collaboration with my close friend Ivan Marazzi and team. Spearheaded in the lab by a terrific student @denistorrre We uncover a role for RNA catabolism in regulating euchromatic ERV expression and potency. cell.com/molecular-cell…
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Big thanks to my co-mentor Robert Sebra, our collaborator Dalit Ben-Yosef, Nancy Francoeur, Yael Kalma, and everyone else on the team! 4/4
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If you are interested, check out our accompanying resource website, where you can search your genes of interest, download all raw and processed data, and access source code: denis-torre.github.io/embryo-transcr… 3/4
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Excited to share our work investigating the human preimplantation embryo transcriptome by long-read sequencing! Here, we combined @PacBio IsoSeq and @Illumina RNA-Seq, finding thousands of novel isoforms and genes:
nature.com/articles/s4146… 1/4
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ChEA3: transcription factor enrichment analysis by orthogonal omics integration academic.oup.com/nar/advance-ar…
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Geneshot: search engine for ranking genes from arbitrary text queries academic.oup.com/nar/advance-ar…
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Denis Torre retweetledi
Gene set enrichment analysis for model organisms academic.oup.com/nar/advance-ar…
Dansk
Denis Torre retweetledi
Dept of #Pharmacological Sciences @IcahnMountSinai Works in Progress Seminar May 10th: Megan Wojciechowicz, #Bioinformatician in the @MaayanLab will present "Global Analysis of Published Bioinformatics Tools" bit.ly/2DQXRBJ #BD2K #Bioinformatics @BD2KLINCSDCIC
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Denis Torre retweetledi
#ChEA3 amp.pharm.mssm.edu/chea3 is a brand new app from the @MaayanLab to perform transcription factor enrichment analysis by integration of data from #ChIPseq #RNAseq and other omics resources. Congrats to @AlexandraKeenan @denistorrre @alexlachmann @BD2KLINCSDCIC #bioinformatics
GIF
Manhattan, NY 🇺🇸 English
Denis Torre retweetledi
The press release about #BioJupies is out: eurekalert.org/pub_releases/2… mountsinai.org/about/newsroom… @idg_pharos @DruggableGenome @nih_dcppc @NIH_CommonFund @BD2KLINCSDCIC @LINCSProgram @IcahnInstitute @IcahnMountSinai #BigData #Bioinformatics @ProjectJupyter @CellSystemsCP
AviMaayan@AviMaayan
BioJupies biojupies.cloud is now published in @CellSystemsCP cell.com/cell-systems/f… We now added user accounts so you can return back to the datasets you analyzed and the notebooks you generated. Congrats to @denistorrre and @alexlachmann for a job well done!!!
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Denis Torre retweetledi
This tool will cut out hours of work when analyzing RNA-Seq data. It supports raw RNA-Seq data as well as well as analysis of 300000 published gene expression samples.
AviMaayan@AviMaayan
BioJupies biojupies.cloud is now published in @CellSystemsCP cell.com/cell-systems/f… We now added user accounts so you can return back to the datasets you analyzed and the notebooks you generated. Congrats to @denistorrre and @alexlachmann for a job well done!!!
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Denis Torre retweetledi
BioJupies biojupies.cloud is now published in @CellSystemsCP cell.com/cell-systems/f… We now added user accounts so you can return back to the datasets you analyzed and the notebooks you generated. Congrats to @denistorrre and @alexlachmann for a job well done!!!
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Denis Torre retweetledi
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